Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG4265-RA through 18771 annotations produced 1 hits



ubiquitin carboxyl terminal hydrolase (Uch):

Annotation Number : CG4265
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010288
Gbrowse : chr2L:2212737-2214179 (-) // 100.0 //
Probeset : 1624240_at
Accessions : protein= NP_476940;, nucleotide= NM_057592;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferre
Interpro : 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activit
FlyMine data for FBgn0010288.
BDGP gene expression has embryonic in situ data for Uch: 4 pix of staining in 1 body parts.
Homophila reports that CG4265 is a close match (7e-44) to human gene PARK5;UCHL1 (NP_004172), a gene associated with Parkinson disease, familial, 168600 (3).
VDRC has 3 RNAi stocks for FBgn0010288 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain367 104 of 4 0.40Down
Head263 74 of 4 0.30Down
Eye357 124 of 4 0.40Down
Thoracicoabdominal ganglion486 164 of 4 0.50Down
Salivary gland410 164 of 4 0.46Down
Crop452 104 of 4 0.50Down
Midgut528 174 of 4 0.60Down
Tubule366 264 of 4 0.40Down
Hindgut406 74 of 4 0.50Down
Heart566 154 of 4 0.63Down
Fat body229 304 of 4 0.26Down
Ovary1280 284 of 4 1.40Up
Testis1578 454 of 4 1.80Up
Male accessory glands483 54 of 4 0.50Down
Virgin spermatheca241 34 of 4 0.27Down
Mated spermatheca230 84 of 4 0.26Down
Adult carcass296 74 of 4 0.30Down
Larval CNS1456 224 of 4 1.63Up
Larval Salivary gland1074 504 of 4 1.20Up
Larval midgut1296 644 of 4 1.45Up
Larval tubule2373 704 of 4 2.70Up
Larval hindgut1051 674 of 4 1.18None
Larval fat body631 244 of 4 0.70Down
Larval trachea751 664 of 4 0.84Down
Larval carcass1175 1434 of 4 1.32None
S2 cells (growing)748 124 of 4 0.84Down
Whole fly893 134 of 4

Looking for CG4265-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime