FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4335-RA through 18771 annotations produced 1 hits

chr3R:16232391-16233545 (-) // 100.0 // ():

Annotation Number : CG4335
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1638038_at
Accessions : protein= , nucleotide= NP_650886;
Pathway : 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation reduction // i
FlyMine data for full length.
BioGrid reports that CG4335 interacts with CG6544 CG7488 CG4335 CG6706 CG6749 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	0.10	Down
Head	285 ± 27	4 of 4	4.50	Up
Eye	74 ± 12	4 of 4	1.19	None
Thoracicoabdominal ganglion	7 ± 1	1 of 4	0.10	Down
Salivary gland	13 ± 0	0 of 4	0.21	Down
Crop	11 ± 1	1 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.00	Down
Tubule	10 ± 1	0 of 4	0.20	Down
Hindgut	19 ± 2	4 of 4	0.30	Down
Heart	290 ± 16	4 of 4	4.59	Up
Fat body	593 ± 56	4 of 4	9.40	Up
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	2 ± 0	0 of 4	0.00	Down
Male accessory glands	2 ± 0	0 of 4	0.00	Down
Virgin spermatheca	358 ± 46	4 of 4	5.67	Up
Mated spermatheca	564 ± 70	4 of 4	8.94	Up
Adult carcass	310 ± 22	4 of 4	4.90	Up
Larval CNS	2 ± 2	0 of 4	0.04	Down
Larval Salivary gland	20 ± 3	3 of 4	0.32	Down
Larval midgut	5 ± 2	0 of 4	0.08	Down
Larval tubule	3 ± 0	0 of 4	0.10	Down
Larval hindgut	15 ± 2	3 of 4	0.24	Down
Larval fat body	149 ± 12	4 of 4	2.40	Up
Larval trachea	9 ± 10	1 of 4	0.14	Down
Larval carcass	6 ± 2	0 of 4	0.11	Down
S2 cells (growing)	1 ± 0	0 of 4	0.02	Down
Whole fly	63 ± 7	4 of 4

Looking for CG4335-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720