FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4341-RA through 18771 annotations produced 1 hits

(CG4341):

Annotation Number : CG4341
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028481
Gbrowse : chr2L:922794-958100 (+) // 100.0 //
Probeset : 1628782_at
Accessions : protein= NP_001097048; /// NP_608558;, nucleotide= NM_001103578; /// NM_134714;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005488 // binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic ann
FlyMine data for FBgn0028481.
VDRC has 2 RNAi stocks for FBgn0028481 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	719 ± 22	4 of 4	40.40	Up
Head	118 ± 1	4 of 4	6.70	Up
Eye	26 ± 2	4 of 4	1.46	None
Thoracicoabdominal ganglion	404 ± 7	4 of 4	22.70	Up
Salivary gland	1 ± 0	0 of 4	0.06	Down
Crop	1 ± 0	0 of 4	0.10	Down
Midgut	1 ± 1	0 of 4	0.10	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	0 ± 0	0 of 4	0.10	Down
Heart	1 ± 0	0 of 4	0.08	Down
Fat body	3 ± 2	0 of 4	0.20	Down
Ovary	1 ± 1	0 of 4	0.10	Down
Testis	19 ± 1	4 of 4	1.10	None
Male accessory glands	9 ± 3	1 of 4	0.50	None
Virgin spermatheca	2 ± 0	0 of 4	0.13	Down
Mated spermatheca	2 ± 1	0 of 4	0.16	Down
Adult carcass	5 ± 2	0 of 4	0.30	Down
Larval CNS	293 ± 35	4 of 4	16.49	Up
Larval Salivary gland	2 ± 1	0 of 4	0.13	Down
Larval midgut	0 ± 0	0 of 4	0.03	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	0 ± 0	0 of 4	0.04	Down
Larval fat body	4 ± 1	0 of 4	0.20	Down
Larval trachea	0 ± 0	0 of 4	0.03	Down
Larval carcass	4 ± 1	0 of 4	0.23	Down
S2 cells (growing)	0 ± 0	0 of 4	0.04	Down
Whole fly	17 ± 2	4 of 4

Looking for CG4341-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720