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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG4371-RA through 18771 annotations produced 1 hits



Glutathione S transferase D7 (GstD7):

Annotation Number : CG4371
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010043
Gbrowse : chr3R:8204267-8204942 (+) // 100.0 //
Probeset : 1624793_at
Accessions : protein= NP_525114;, nucleotide= NM_080375;
Interpro : 0004364 // glutathione transferase activity // inferred from direct assay /// 0004364 // glutathione transferase activit
FlyMine data for FBgn0010043.
VDRC has 2 RNAi stocks for FBgn0010043 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.30None
Head1 00 of 4 0.30None
Eye1 00 of 4 0.31None
Thoracicoabdominal ganglion1 00 of 4 0.20None
Salivary gland13 40 of 4 2.46None
Crop2 10 of 4 0.40None
Midgut119 124 of 422.30Up
Tubule3 00 of 4 0.70Down
Hindgut4 10 of 4 0.80None
Heart2 10 of 4 0.54None
Fat body2 00 of 4 0.50None
Ovary1 00 of 4 0.20None
Testis9 10 of 4 1.70None
Male accessory glands2 00 of 4 0.50None
Virgin spermatheca2 00 of 4 0.42None
Mated spermatheca5 10 of 4 1.02None
Adult carcass2 00 of 4 0.50None
Larval CNS1 10 of 4 0.30None
Larval Salivary gland2 00 of 4 0.43None
Larval midgut279 434 of 452.21Up
Larval tubule5 20 of 4 1.00None
Larval hindgut29 13 of 4 5.59Up
Larval fat body2 00 of 4 0.50None
Larval trachea15 32 of 4 2.81Up
Larval carcass4 20 of 4 0.88None
S2 cells (growing)139 44 of 426.13Up
Whole fly5 30 of 4

Looking for CG4371-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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