FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4402-RA through 18771 annotations produced 1 hits

lysyl oxidase-like 2 (lox2):

Annotation Number : CG4402
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034660
Gbrowse : chr2R:17677120-17679160 (-) // 100.0 //
Probeset : 1635226_at
Accessions : protein= NP_523806;, nucleotide= NM_079082;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : "0004720 // protein-lysine 6-oxidase activity // inferred from sequence or structural similarity /// 0004720 // protein-
FlyMine data for FBgn0034660.
Homophila reports that CG4402 is a close match (2e-23) to human gene MSR1 (NP_619729), a gene associated with Prostate cancer, hereditary, 176807 (3).
VDRC has 2 RNAi stocks for FBgn0034660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 0	0 of 4	0.30	Down
Head	169 ± 12	4 of 4	8.30	Up
Eye	616 ± 13	4 of 4	30.24	Up
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.10	Down
Salivary gland	7 ± 3	0 of 4	0.37	Down
Crop	5 ± 3	0 of 4	0.30	Down
Midgut	3 ± 1	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	8 ± 0	0 of 4	0.40	Down
Heart	2 ± 1	0 of 4	0.13	Down
Fat body	2 ± 1	0 of 4	0.12	Down
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	9 ± 1	1 of 4	0.50	Down
Male accessory glands	3 ± 1	0 of 4	0.20	Down
Virgin spermatheca	3 ± 1	0 of 4	0.17	Down
Mated spermatheca	2 ± 0	0 of 4	0.11	Down
Adult carcass	49 ± 3	4 of 4	2.40	Up
Larval CNS	3 ± 1	0 of 4	0.17	Down
Larval Salivary gland	2 ± 0	0 of 4	0.11	Down
Larval midgut	6 ± 1	0 of 4	0.30	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	3 ± 1	0 of 4	0.18	Down
Larval fat body	7 ± 1	0 of 4	0.30	Down
Larval trachea	10 ± 12	1 of 4	0.50	None
Larval carcass	4 ± 1	0 of 4	0.21	Down
S2 cells (growing)	4 ± 0	0 of 4	0.20	Down
Whole fly	20 ± 1	4 of 4

Looking for CG4402-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720