Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG4423-RA through 18771 annotations produced 1 hits



Glutathione S transferase D6 (GstD6):

Annotation Number : CG4423
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010042
Gbrowse : chr3R:8202893-8203541 (+) // 100.0 //
Probeset : 1626136_at
Accessions : protein= NP_524915;, nucleotide= NM_080176;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0010042.
BioGrid reports that CG4423 interacts with CG9597 .
VDRC has 4 RNAi stocks for FBgn0010042 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.50None
Head1 00 of 4 0.40None
Eye0 00 of 4 0.21None
Thoracicoabdominal ganglion2 10 of 4 0.70None
Salivary gland11 40 of 4 3.85None
Crop3 10 of 4 1.20None
Midgut4 10 of 4 1.40None
Tubule4 00 of 4 1.40Up
Hindgut3 10 of 4 1.30None
Heart8 21 of 4 2.60None
Fat body3 20 of 4 1.03None
Ovary1 00 of 4 0.50None
Testis1 00 of 4 0.40None
Male accessory glands1 00 of 4 0.60None
Virgin spermatheca1 00 of 4 0.61None
Mated spermatheca2 10 of 4 0.78None
Adult carcass2 00 of 4 0.80None
Larval CNS0 00 of 4 0.10None
Larval Salivary gland4 10 of 4 1.46None
Larval midgut44 64 of 414.59Up
Larval tubule3 10 of 4 1.20None
Larval hindgut5 10 of 4 1.63None
Larval fat body6 31 of 4 2.00None
Larval trachea3 10 of 4 1.06None
Larval carcass1 00 of 4 0.50None
S2 cells (growing)3 10 of 4 1.12None
Whole fly3 10 of 4

Looking for CG4423-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime