FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4454-RA through 18771 annotations produced 1 hits

Borealin (borr):

Annotation Number : CG4454
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032105
Gbrowse : chr2L:9251471-9253116 (-) // 100.0 //
Probeset : 1634359_a_at
Accessions : protein= NP_609279; /// NP_723450;, nucleotide= NM_135435; /// NM_164850;
Pathway : embryonic // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation 0000775
Interpro : centromeric region // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 00
FlyMine data for FBgn0032105.
BDGP gene expression has embryonic in situ data for CG4454: 23 pix of staining in 10 body parts.
BioGrid reports that CG4454 interacts with CG5771 CG6459 CG6576 CG7386 .
VDRC has 1 RNAi stocks for FBgn0032105 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.00	Down
Head	2 ± 1	0 of 4	0.00	Down
Eye	2 ± 0	0 of 4	0.01	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.00	Down
Salivary gland	13 ± 2	0 of 4	0.03	Down
Crop	8 ± 2	2 of 4	0.00	Down
Midgut	14 ± 1	1 of 4	0.00	Down
Tubule	12 ± 5	0 of 4	0.00	Down
Hindgut	8 ± 1	1 of 4	0.00	Down
Heart	31 ± 2	4 of 4	0.07	Down
Fat body	36 ± 3	4 of 4	0.08	Down
Ovary	1282 ± 10	4 of 4	3.00	Up
Testis	236 ± 6	4 of 4	0.50	Down
Male accessory glands	2 ± 0	0 of 4	0.00	Down
Virgin spermatheca	22 ± 2	4 of 4	0.05	Down
Mated spermatheca	16 ± 4	3 of 4	0.04	Down
Adult carcass	22 ± 2	2 of 4	0.10	Down
Larval CNS	590 ± 35	4 of 4	1.37	Up
Larval Salivary gland	4 ± 2	0 of 4	0.01	Down
Larval midgut	35 ± 4	4 of 4	0.08	Down
Larval tubule	19 ± 0	3 of 4	0.00	Down
Larval hindgut	56 ± 1	4 of 4	0.13	Down
Larval fat body	91 ± 27	4 of 4	0.20	Down
Larval trachea	156 ± 27	4 of 4	0.36	Down
Larval carcass	74 ± 4	4 of 4	0.17	Down
S2 cells (growing)	276 ± 3	4 of 4	0.64	Down
Whole fly	431 ± 32	4 of 4

Looking for CG4454-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720