FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4523-RA through 18771 annotations produced 1 hits

Pink1 (Pink1):

Annotation Number : CG4523
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029891
Gbrowse : chrX:6577880-6581047 (+) // 99.86 //
Probeset : 1639403_s_at
Accessions : protein= NP_001027049; /// NP_001027050; /// NP_001027051; /// NP_001027052; /// NP_001027053; /// NP_001027054; /// NP_572340; /// NP_727110;, nucleotide= NM_001031878; /// NM_001031879; /// NM_001031880; /// NM_001031881; /// NM_001031882; /// NM_001031883; /// NM_132112; /// NM_167083;
Pathway : 0016006 // Nebenkern // inferred from direct assay
Interpro : 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0029891.
BDGP gene expression has embryonic in situ data for CG4523: 4 pix of staining in 1 body parts.
Homophila reports that CG4523 is a close match (2e-66) to human gene PINK1;PARK6 (NP_115785), a gene associated with Parkinson disease 6, early onset, 605909 (3).
BioGrid reports that CG4523 interacts with CG8614 .
TRiP has 5 RNAi stocks for FBgn0029891 available for purchase.
VDRC has 2 RNAi stocks for FBgn0029891 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	327 ± 6	4 of 4	0.90	None
Head	469 ± 18	4 of 4	1.40	Up
Eye	615 ± 10	4 of 4	1.78	Up
Thoracicoabdominal ganglion	436 ± 18	4 of 4	1.30	Up
Salivary gland	574 ± 13	4 of 4	1.66	Up
Crop	609 ± 37	4 of 4	1.80	Up
Midgut	286 ± 12	4 of 4	0.80	Down
Tubule	515 ± 24	4 of 4	1.50	Up
Hindgut	494 ± 10	4 of 4	1.40	Up
Heart	362 ± 16	4 of 4	1.05	None
Fat body	279 ± 23	4 of 4	0.81	Down
Ovary	231 ± 7	4 of 4	0.70	Down
Testis	257 ± 5	4 of 4	0.70	Down
Male accessory glands	389 ± 21	4 of 4	1.10	None
Virgin spermatheca	259 ± 23	4 of 4	0.75	Down
Mated spermatheca	223 ± 6	4 of 4	0.65	Down
Adult carcass	893 ± 36	4 of 4	2.60	Up
Larval CNS	142 ± 13	4 of 4	0.41	Down
Larval Salivary gland	207 ± 9	4 of 4	0.60	Down
Larval midgut	315 ± 17	4 of 4	0.91	None
Larval tubule	399 ± 14	4 of 4	1.20	Up
Larval hindgut	363 ± 31	4 of 4	1.05	None
Larval fat body	152 ± 7	4 of 4	0.40	Down
Larval trachea	149 ± 44	4 of 4	0.43	Down
Larval carcass	353 ± 39	4 of 4	1.02	None
S2 cells (growing)	205 ± 10	4 of 4	0.60	Down
Whole fly	345 ± 12	4 of 4

Looking for CG4523-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720