FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4560-RB through 18771 annotations produced 2 hits

Arpc3A (Arpc3A):

Annotation Number : CG4560
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038369
Gbrowse : chr3R:11660487-11661272 (+) // 100.0 //
Probeset : 1638092_a_at
Accessions : protein= NP_650498; /// NP_732075;, nucleotide= NM_142241; /// NM_169675;
Pathway : 0005856 // cytoskeleton // inferred from electronic annotation
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity
FlyMine data for FBgn0038369.
TRiP has 1 RNAi stocks for FBgn0038369 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038369 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	212 ± 2	4 of 4	1.10	None
Head	149 ± 6	4 of 4	0.80	None
Eye	175 ± 6	4 of 4	0.89	None
Thoracicoabdominal ganglion	262 ± 4	4 of 4	1.30	Up
Salivary gland	165 ± 7	4 of 4	0.84	None
Crop	177 ± 8	4 of 4	0.90	None
Midgut	194 ± 2	4 of 4	1.00	None
Tubule	118 ± 2	4 of 4	0.60	Down
Hindgut	146 ± 4	4 of 4	0.70	None
Heart	248 ± 20	4 of 4	1.26	None
Fat body	103 ± 3	4 of 4	0.53	Down
Ovary	292 ± 8	4 of 4	1.50	Up
Testis	147 ± 9	4 of 4	0.70	None
Male accessory glands	181 ± 25	4 of 4	0.90	None
Virgin spermatheca	86 ± 2	4 of 4	0.44	Down
Mated spermatheca	107 ± 9	4 of 4	0.54	Down
Adult carcass	111 ± 4	4 of 4	0.60	Down
Larval CNS	319 ± 24	4 of 4	1.62	Up
Larval Salivary gland	281 ± 11	4 of 4	1.43	Up
Larval midgut	176 ± 8	4 of 4	0.89	None
Larval tubule	258 ± 14	4 of 4	1.30	Up
Larval hindgut	214 ± 9	4 of 4	1.09	None
Larval fat body	270 ± 14	4 of 4	1.40	Up
Larval trachea	555 ± 20	4 of 4	2.82	Up
Larval carcass	182 ± 18	4 of 4	0.93	None
S2 cells (growing)	546 ± 15	4 of 4	2.77	Up
Whole fly	197 ± 19	4 of 4

Arpc3A (Arpc3A):

Annotation Number : CG4560
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038369
Gbrowse : chr3R:11660487-11661272 (+) // 100.0 //
Probeset : 1626556_at
Accessions : protein= NP_650498; /// NP_732075;, nucleotide= NM_142241; /// NM_169675;
Pathway : 0005856 // cytoskeleton // inferred from electronic annotation
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity
FlyMine data for FBgn0038369.
TRiP has 1 RNAi stocks for FBgn0038369 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038369 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	50 ± 5	4 of 4	1.30	None
Head	33 ± 1	4 of 4	0.80	None
Eye	29 ± 1	4 of 4	0.76	None
Thoracicoabdominal ganglion	61 ± 6	4 of 4	1.60	None
Salivary gland	59 ± 4	2 of 4	1.51	None
Crop	51 ± 3	4 of 4	1.30	None
Midgut	70 ± 2	3 of 4	1.80	Up
Tubule	39 ± 2	3 of 4	1.00	None
Hindgut	49 ± 3	4 of 4	1.30	None
Heart	31 ± 2	4 of 4	0.81	None
Fat body	35 ± 5	3 of 4	0.89	None
Ovary	65 ± 0	4 of 4	1.70	Up
Testis	30 ± 1	4 of 4	0.80	None
Male accessory glands	40 ± 5	2 of 4	1.00	None
Virgin spermatheca	18 ± 2	1 of 4	0.47	Down
Mated spermatheca	21 ± 1	0 of 4	0.54	None
Adult carcass	34 ± 2	3 of 4	0.90	None
Larval CNS	69 ± 8	4 of 4	1.76	Up
Larval Salivary gland	66 ± 1	4 of 4	1.69	Up
Larval midgut	47 ± 1	0 of 4	1.19	None
Larval tubule	52 ± 4	4 of 4	1.30	None
Larval hindgut	52 ± 3	4 of 4	1.33	None
Larval fat body	55 ± 3	4 of 4	1.40	None
Larval trachea	61 ± 4	4 of 4	1.56	Up
Larval carcass	40 ± 1	4 of 4	1.04	None
S2 cells (growing)	108 ± 13	4 of 4	2.75	Up
Whole fly	39 ± 6	4 of 4

Looking for CG4560-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720