FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4620-RA through 18771 annotations produced 2 hits

unkempt (unk):

Annotation Number : CG4620
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004395
Gbrowse : chr3R:18977285-18983592 (-) // 99.74 //
Probeset : 1633020_at
Accessions : protein= NP_788722; /// NP_788723;, nucleotide= NM_176545; /// NM_176546;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable autho
FlyMine data for FBgn0004395.
VDRC has 2 RNAi stocks for FBgn0004395 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	407 ± 13	4 of 4	15.60	Up
Head	75 ± 6	4 of 4	2.90	Up
Eye	210 ± 19	4 of 4	8.08	Up
Thoracicoabdominal ganglion	275 ± 11	4 of 4	10.60	Up
Salivary gland	71 ± 8	4 of 4	2.76	Up
Crop	113 ± 14	4 of 4	4.30	Up
Midgut	43 ± 3	4 of 4	1.70	Up
Tubule	42 ± 3	4 of 4	1.60	Up
Hindgut	65 ± 6	4 of 4	2.50	Up
Heart	63 ± 2	4 of 4	2.45	Up
Fat body	45 ± 9	4 of 4	1.76	Up
Ovary	15 ± 0	4 of 4	0.60	Down
Testis	9 ± 1	4 of 4	0.40	Down
Male accessory glands	52 ± 2	4 of 4	2.00	Up
Virgin spermatheca	169 ± 9	4 of 4	6.50	Up
Mated spermatheca	228 ± 29	4 of 4	8.75	Up
Adult carcass	28 ± 2	4 of 4	1.10	None
Larval CNS	451 ± 37	4 of 4	17.34	Up
Larval Salivary gland	80 ± 9	4 of 4	3.08	Up
Larval midgut	33 ± 4	4 of 4	1.29	None
Larval tubule	137 ± 10	4 of 4	5.30	Up
Larval hindgut	52 ± 2	4 of 4	2.00	Up
Larval fat body	131 ± 17	4 of 4	5.10	Up
Larval trachea	205 ± 29	4 of 4	7.88	Up
Larval carcass	73 ± 6	4 of 4	2.84	Up
S2 cells (growing)	105 ± 1	4 of 4	4.06	Up
Whole fly	26 ± 0	4 of 4

unkempt (unk):

Annotation Number : CG4620
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004395
Gbrowse : chr3R:18978759-18983592 (-) // 100.0 //
Probeset : 1641033_a_at
Accessions : protein= NP_788722; /// NP_788723;, nucleotide= NM_176545; /// NM_176546;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable autho
FlyMine data for FBgn0004395.
VDRC has 2 RNAi stocks for FBgn0004395 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	23 ± 2	4 of 4	0.60	Down
Head	12 ± 2	4 of 4	0.30	Down
Eye	4 ± 2	1 of 4	0.13	Down
Thoracicoabdominal ganglion	12 ± 1	3 of 4	0.30	Down
Salivary gland	23 ± 2	3 of 4	0.64	Down
Crop	17 ± 2	4 of 4	0.50	Down
Midgut	13 ± 1	4 of 4	0.40	Down
Tubule	8 ± 0	2 of 4	0.20	Down
Hindgut	24 ± 1	4 of 4	0.70	Down
Heart	5 ± 0	2 of 4	0.14	Down
Fat body	19 ± 6	4 of 4	0.53	Down
Ovary	110 ± 4	4 of 4	3.10	Up
Testis	6 ± 0	4 of 4	0.20	Down
Male accessory glands	27 ± 2	4 of 4	0.80	Down
Virgin spermatheca	10 ± 0	4 of 4	0.28	Down
Mated spermatheca	12 ± 1	4 of 4	0.35	Down
Adult carcass	12 ± 2	3 of 4	0.30	Down
Larval CNS	68 ± 7	4 of 4	1.90	Up
Larval Salivary gland	27 ± 4	4 of 4	0.76	None
Larval midgut	19 ± 3	4 of 4	0.54	Down
Larval tubule	31 ± 1	4 of 4	0.90	None
Larval hindgut	33 ± 1	4 of 4	0.92	None
Larval fat body	30 ± 3	4 of 4	0.80	None
Larval trachea	10 ± 1	4 of 4	0.29	Down
Larval carcass	23 ± 1	4 of 4	0.64	Down
S2 cells (growing)	65 ± 6	4 of 4	1.81	Up
Whole fly	36 ± 2	4 of 4

Looking for CG4620-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720