FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4633-RA through 18771 annotations produced 1 hits

mitochondrial alanyl-tRNA synthetase (Aats-ala-m):

Annotation Number : CG4633
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028962
Gbrowse : chr3L:5139204-5142954 (+) // 100.0 //
Probeset : 1636795_at
Accessions : protein= NP_523932;, nucleotide= NM_079208;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or st
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fr
FlyMine data for FBgn0028962.
BDGP gene expression has embryonic in situ data for Aats-ala-m: 10 pix of staining in 3 body parts.
VDRC has 2 RNAi stocks for FBgn0028962 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	84 ± 5	4 of 4	1.40	Up
Head	50 ± 4	4 of 4	0.80	None
Eye	24 ± 2	4 of 4	0.40	Down
Thoracicoabdominal ganglion	120 ± 7	4 of 4	2.00	Up
Salivary gland	62 ± 10	1 of 4	1.02	None
Crop	64 ± 2	4 of 4	1.00	None
Midgut	61 ± 0	1 of 4	1.00	None
Tubule	61 ± 0	4 of 4	1.00	None
Hindgut	81 ± 2	4 of 4	1.30	Up
Heart	58 ± 2	4 of 4	0.94	None
Fat body	106 ± 13	4 of 4	1.72	Up
Ovary	96 ± 1	4 of 4	1.60	Up
Testis	15 ± 1	1 of 4	0.20	Down
Male accessory glands	61 ± 6	1 of 4	1.00	None
Virgin spermatheca	108 ± 1	4 of 4	1.76	Up
Mated spermatheca	87 ± 13	4 of 4	1.42	None
Adult carcass	60 ± 4	3 of 4	1.00	None
Larval CNS	97 ± 4	4 of 4	1.58	Up
Larval Salivary gland	58 ± 1	4 of 4	0.95	None
Larval midgut	50 ± 4	0 of 4	0.81	None
Larval tubule	35 ± 2	1 of 4	0.60	Down
Larval hindgut	102 ± 6	4 of 4	1.66	Up
Larval fat body	32 ± 3	0 of 4	0.50	Down
Larval trachea	57 ± 5	4 of 4	0.93	None
Larval carcass	87 ± 7	4 of 4	1.41	Up
S2 cells (growing)	83 ± 3	4 of 4	1.36	Up
Whole fly	61 ± 1	4 of 4

Looking for CG4633-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720