FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4672-RA through 18771 annotations produced 1 hits

TMS1 (TMS1):

Annotation Number : CG4672
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028399
Gbrowse : chr3L:16405854-16408488 (+) // 100.0 //
Probeset : 1639952_at
Accessions : protein= NP_648893;, nucleotide= NM_140636;
Pathway : 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotat
FlyMine data for FBgn0028399.
BDGP gene expression has embryonic in situ data for TMS1: 13 pix of staining in 12 body parts.
VDRC has 1 RNAi stocks for FBgn0028399 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1418 ± 22	4 of 4	4.40	Up
Head	1084 ± 23	4 of 4	3.40	Up
Eye	2092 ± 46	4 of 4	6.49	Up
Thoracicoabdominal ganglion	1541 ± 49	4 of 4	4.80	Up
Salivary gland	911 ± 46	4 of 4	2.83	Up
Crop	565 ± 8	4 of 4	1.80	Up
Midgut	439 ± 18	4 of 4	1.40	Up
Tubule	2299 ± 60	4 of 4	7.10	Up
Hindgut	891 ± 21	4 of 4	2.80	Up
Heart	936 ± 36	4 of 4	2.91	Up
Fat body	558 ± 38	4 of 4	1.73	Up
Ovary	206 ± 3	4 of 4	0.60	Down
Testis	325 ± 4	4 of 4	1.00	None
Male accessory glands	670 ± 26	4 of 4	2.10	Up
Virgin spermatheca	676 ± 13	4 of 4	2.10	Up
Mated spermatheca	644 ± 33	4 of 4	2.00	Up
Adult carcass	592 ± 40	4 of 4	1.80	Up
Larval CNS	540 ± 44	4 of 4	1.68	Up
Larval Salivary gland	376 ± 10	4 of 4	1.17	Up
Larval midgut	639 ± 70	4 of 4	1.98	Up
Larval tubule	3438 ± 37	4 of 4	10.70	Up
Larval hindgut	1280 ± 97	4 of 4	3.97	Up
Larval fat body	487 ± 58	4 of 4	1.50	None
Larval trachea	594 ± 125	4 of 4	1.84	Up
Larval carcass	447 ± 54	4 of 4	1.39	None
S2 cells (growing)	675 ± 7	4 of 4	2.09	Up
Whole fly	322 ± 14	4 of 4

Looking for CG4672-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720