FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4742-RA through 18771 annotations produced 1 hits

mitochondrial ribosomal protein L22 (mRpL22):

Annotation Number : CG4742
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030786
Gbrowse : chrX:16677986-16679127 (+) // 100.0 //
Probeset : 1640889_at
Accessions : protein= NP_523379;, nucleotide= NM_078655;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0030786.
BDGP gene expression has embryonic in situ data for mRpL22: 9 pix of staining in 13 body parts.
BioGrid reports that CG4742 interacts with CG5941 .
VDRC has 2 RNAi stocks for FBgn0030786 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	223 ± 3	4 of 4	0.90	None
Head	174 ± 5	4 of 4	0.70	Down
Eye	118 ± 3	4 of 4	0.45	Down
Thoracicoabdominal ganglion	191 ± 11	4 of 4	0.70	Down
Salivary gland	240 ± 26	4 of 4	0.92	None
Crop	223 ± 9	4 of 4	0.90	None
Midgut	268 ± 7	4 of 4	1.00	None
Tubule	275 ± 3	4 of 4	1.10	Up
Hindgut	290 ± 5	4 of 4	1.10	None
Heart	217 ± 6	4 of 4	0.83	None
Fat body	243 ± 18	4 of 4	0.93	None
Ovary	349 ± 3	4 of 4	1.30	Up
Testis	74 ± 4	4 of 4	0.30	Down
Male accessory glands	200 ± 7	4 of 4	0.80	Down
Virgin spermatheca	276 ± 8	4 of 4	1.06	None
Mated spermatheca	290 ± 18	4 of 4	1.11	None
Adult carcass	195 ± 4	4 of 4	0.70	Down
Larval CNS	229 ± 13	4 of 4	0.88	None
Larval Salivary gland	252 ± 21	4 of 4	0.96	None
Larval midgut	164 ± 4	4 of 4	0.63	Down
Larval tubule	201 ± 10	4 of 4	0.80	Down
Larval hindgut	234 ± 15	4 of 4	0.90	None
Larval fat body	153 ± 17	4 of 4	0.60	Down
Larval trachea	190 ± 15	4 of 4	0.73	Down
Larval carcass	213 ± 16	4 of 4	0.82	None
S2 cells (growing)	286 ± 8	4 of 4	1.09	None
Whole fly	261 ± 16	4 of 4

Looking for CG4742-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720