Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG4797-RB through 18771 annotations produced 1 hits



Sugar transporter-like (CG4797):

Annotation Number : CG4797
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034909
Gbrowse : chr2R:19699707-19705849 (-) // 100.0 //
Probeset : 1625477_a_at
Accessions : protein= NP_611834; /// NP_726368;, nucleotide= NM_137990; /// NM_166625;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter
FlyMine data for FBgn0034909.
BDGP gene expression has embryonic in situ data for CG4797: 4 pix of staining in 1 body parts.
Homophila reports that CG4797 is a close match (8e-12) to human gene SLC2A4;GLUT4 (NP_001033), a gene associated with {Diabetes mellitus, noninsulin-dependent} (3).
VDRC has 1 RNAi stocks for FBgn0034909 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain285 94 of 4 4.50Up
Head191 64 of 4 3.00Up
Eye44 34 of 4 0.71None
Thoracicoabdominal ganglion476 84 of 4 7.50Up
Salivary gland3 10 of 4 0.05Down
Crop82 20 of 4 1.30None
Midgut72 43 of 4 1.10None
Tubule6 10 of 4 0.10Down
Hindgut246 64 of 4 3.90Up
Heart262 234 of 4 4.12Up
Fat body401 444 of 4 6.30Up
Ovary13 10 of 4 0.20Down
Testis5 20 of 4 0.10Down
Male accessory glands62 100 of 4 1.00None
Virgin spermatheca150 184 of 4 2.37Up
Mated spermatheca210 184 of 4 3.31Up
Adult carcass352 204 of 4 5.50Up
Larval CNS65 114 of 4 1.04None
Larval Salivary gland30 30 of 4 0.48Down
Larval midgut178 254 of 4 2.81Up
Larval tubule10 10 of 4 0.20Down
Larval hindgut127 134 of 4 2.00Up
Larval fat body164 214 of 4 2.60Up
Larval trachea42 153 of 4 0.67None
Larval carcass70 82 of 4 1.10None
S2 cells (growing)40 20 of 4 0.63Down
Whole fly63 64 of 4

Looking for CG4797-RB. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime