FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4816-RA through 18771 annotations produced 1 hits

quaking related 54B (qkr54B):

Annotation Number : CG4816
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022987
Gbrowse : chr2R:13357136-13362158 (+) // 100.0 //
Probeset : 1640822_s_at
Accessions : protein= NP_523772; /// NP_725679; /// NP_725680;, nucleotide= NM_079048; /// NM_166230; /// NM_166231;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /
FlyMine data for FBgn0022987.
BDGP gene expression has embryonic in situ data for qkr54B: 4 pix of staining in 1 body parts.
BioGrid reports that CG4816 interacts with CG4816 .
TRiP has 1 RNAi stocks for FBgn0022987 available for purchase.
VDRC has 2 RNAi stocks for FBgn0022987 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	198 ± 4	4 of 4	4.10	Up
Head	120 ± 17	4 of 4	2.50	Up
Eye	119 ± 19	4 of 4	2.43	Up
Thoracicoabdominal ganglion	159 ± 8	4 of 4	3.20	Up
Salivary gland	43 ± 4	4 of 4	0.88	None
Crop	53 ± 1	4 of 4	1.10	None
Midgut	30 ± 2	4 of 4	0.60	Down
Tubule	36 ± 2	4 of 4	0.70	Down
Hindgut	36 ± 1	4 of 4	0.70	Down
Heart	35 ± 2	4 of 4	0.72	Down
Fat body	44 ± 6	4 of 4	0.91	None
Ovary	50 ± 2	4 of 4	1.00	None
Testis	13 ± 1	4 of 4	0.30	Down
Male accessory glands	31 ± 4	4 of 4	0.60	Down
Virgin spermatheca	16 ± 1	4 of 4	0.34	Down
Mated spermatheca	12 ± 1	4 of 4	0.25	Down
Adult carcass	48 ± 2	4 of 4	1.00	None
Larval CNS	303 ± 19	4 of 4	6.20	Up
Larval Salivary gland	35 ± 2	4 of 4	0.72	Down
Larval midgut	26 ± 3	4 of 4	0.53	Down
Larval tubule	49 ± 1	4 of 4	1.00	None
Larval hindgut	40 ± 2	4 of 4	0.82	None
Larval fat body	41 ± 1	4 of 4	0.80	None
Larval trachea	71 ± 5	4 of 4	1.46	Up
Larval carcass	69 ± 5	4 of 4	1.43	Up
S2 cells (growing)	3 ± 1	0 of 4	0.06	Down
Whole fly	49 ± 3	4 of 4

Looking for CG4816-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720