FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4817-RA through 18771 annotations produced 1 hits

structure-specific recognition protein (Ssrp):

Annotation Number : CG4817
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010278
Gbrowse : chr2R:19693883-19696518 (-) // 100.0 //
Probeset : 1624815_at
Accessions : protein= NP_523830;, nucleotide= NM_079106;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author sta
Interpro : 0000217 // DNA secondary structure binding // inferred from sequence or structural similarity /// 0003677 // DNA binding
FlyMine data for FBgn0010278.
BioGrid reports that CG4817 interacts with CG33261 CG33261 .
TRiP has 4 RNAi stocks for FBgn0010278 available for purchase.
VDRC has 2 RNAi stocks for FBgn0010278 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	65 ± 3	4 of 4	0.40	Down
Head	51 ± 2	4 of 4	0.30	Down
Eye	35 ± 2	4 of 4	0.21	Down
Thoracicoabdominal ganglion	70 ± 4	4 of 4	0.40	Down
Salivary gland	36 ± 10	1 of 4	0.21	Down
Crop	46 ± 4	4 of 4	0.30	Down
Midgut	48 ± 4	4 of 4	0.30	Down
Tubule	51 ± 7	4 of 4	0.30	Down
Hindgut	52 ± 3	4 of 4	0.30	Down
Heart	30 ± 1	4 of 4	0.18	Down
Fat body	53 ± 5	4 of 4	0.31	Down
Ovary	404 ± 14	4 of 4	2.40	Up
Testis	107 ± 7	4 of 4	0.60	Down
Male accessory glands	109 ± 5	4 of 4	0.60	Down
Virgin spermatheca	40 ± 1	4 of 4	0.23	Down
Mated spermatheca	46 ± 7	4 of 4	0.27	Down
Adult carcass	52 ± 4	4 of 4	0.30	Down
Larval CNS	413 ± 14	4 of 4	2.41	Up
Larval Salivary gland	129 ± 7	4 of 4	0.75	Down
Larval midgut	60 ± 4	4 of 4	0.35	Down
Larval tubule	36 ± 2	4 of 4	0.20	Down
Larval hindgut	75 ± 3	4 of 4	0.44	Down
Larval fat body	61 ± 3	4 of 4	0.40	Down
Larval trachea	163 ± 14	4 of 4	0.95	None
Larval carcass	95 ± 9	4 of 4	0.56	Down
S2 cells (growing)	320 ± 20	4 of 4	1.87	Up
Whole fly	171 ± 8	4 of 4

Looking for CG4817-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720