FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4824-RA through 18771 annotations produced 1 hits

Bicaudal-C (BicC):

Annotation Number : CG4824
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000182
Gbrowse : chr2L:16042031-16048626 (+) // 100.0 //
Probeset : 1631632_s_at
Accessions : protein= NP_476865; /// NP_723948; /// NP_723949;, nucleotide= NM_057517; /// NM_165144; /// NM_165145;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from sequence or s
FlyMine data for FBgn0000182.
BioGrid reports that CG4824 interacts with CG5272 CG7057 CG6172 CG7056 CG7212 CG8368 CG10868 .
TRiP has 2 RNAi stocks for FBgn0000182 available for purchase.
VDRC has 2 RNAi stocks for FBgn0000182 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.00	Down
Head	4 ± 1	1 of 4	0.00	Down
Eye	9 ± 0	1 of 4	0.01	Down
Thoracicoabdominal ganglion	8 ± 0	1 of 4	0.00	Down
Salivary gland	20 ± 3	0 of 4	0.03	Down
Crop	14 ± 2	3 of 4	0.00	Down
Midgut	7 ± 1	1 of 4	0.00	Down
Tubule	26 ± 21	0 of 4	0.00	Down
Hindgut	5 ± 2	0 of 4	0.00	Down
Heart	6 ± 2	0 of 4	0.01	Down
Fat body	26 ± 19	3 of 4	0.04	Down
Ovary	1501 ± 20	4 of 4	2.30	Up
Testis	428 ± 23	4 of 4	0.70	Down
Male accessory glands	4 ± 0	0 of 4	0.00	Down
Virgin spermatheca	30 ± 3	4 of 4	0.05	Down
Mated spermatheca	26 ± 4	3 of 4	0.04	Down
Adult carcass	46 ± 12	4 of 4	0.10	Down
Larval CNS	8 ± 2	4 of 4	0.01	Down
Larval Salivary gland	6 ± 1	1 of 4	0.01	Down
Larval midgut	12 ± 4	2 of 4	0.02	Down
Larval tubule	5 ± 1	0 of 4	0.00	Down
Larval hindgut	5 ± 1	1 of 4	0.01	Down
Larval fat body	40 ± 14	4 of 4	0.10	Down
Larval trachea	6 ± 3	0 of 4	0.01	Down
Larval carcass	4 ± 1	0 of 4	0.01	Down
S2 cells (growing)	5 ± 1	0 of 4	0.01	Down
Whole fly	650 ± 42	4 of 4

Looking for CG4824-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720