FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4882-RA through 18771 annotations produced 1 hits

undefined 1 (CG4882):

Annotation Number : CG4882
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025336
Gbrowse : chr2R:19768339-19769954 (-) // 100.0 //
Probeset : 1639123_at
Accessions : protein= NP_477377;, nucleotide= NM_058029;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0025336.
BDGP gene expression has embryonic in situ data for CG4882: 12 pix of staining in 9 body parts.
VDRC has 2 RNAi stocks for FBgn0025336 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	290 ± 5	4 of 4	1.40	Up
Head	160 ± 5	4 of 4	0.80	Down
Eye	100 ± 6	4 of 4	0.48	Down
Thoracicoabdominal ganglion	325 ± 8	4 of 4	1.60	Up
Salivary gland	235 ± 13	4 of 4	1.14	None
Crop	172 ± 3	4 of 4	0.80	Down
Midgut	142 ± 5	4 of 4	0.70	Down
Tubule	165 ± 10	4 of 4	0.80	Down
Hindgut	194 ± 14	4 of 4	0.90	None
Heart	150 ± 6	4 of 4	0.73	Down
Fat body	169 ± 22	4 of 4	0.82	Down
Ovary	332 ± 7	4 of 4	1.60	Up
Testis	87 ± 2	4 of 4	0.40	Down
Male accessory glands	253 ± 14	4 of 4	1.20	Up
Virgin spermatheca	136 ± 7	4 of 4	0.66	Down
Mated spermatheca	137 ± 2	4 of 4	0.67	Down
Adult carcass	150 ± 6	4 of 4	0.70	Down
Larval CNS	232 ± 12	4 of 4	1.12	Up
Larval Salivary gland	198 ± 8	4 of 4	0.96	None
Larval midgut	96 ± 6	4 of 4	0.46	Down
Larval tubule	126 ± 3	4 of 4	0.60	Down
Larval hindgut	192 ± 9	4 of 4	0.93	None
Larval fat body	114 ± 11	4 of 4	0.60	Down
Larval trachea	181 ± 17	4 of 4	0.88	None
Larval carcass	170 ± 31	4 of 4	0.83	None
S2 cells (growing)	227 ± 5	4 of 4	1.10	None
Whole fly	206 ± 8	4 of 4

Looking for CG4882-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720