FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4894-RA through 18771 annotations produced 1 hits

calcium channel alpha-1 subunit (Ca-alpha1D):

Annotation Number : CG4894
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001991
Gbrowse : chr2L:16170656-16190086 (+) // 100.0 //
Probeset : 1640092_a_at
Accessions : protein= NP_525104; /// NP_602305; /// NP_723952; /// NP_723953;, nucleotide= NM_080365; /// NM_134429; /// NM_165146; /// NM_165147;
Pathway : 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0005891 // voltage-gated cal
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity
FlyMine data for FBgn0001991.
Homophila reports that CG4894 is a close match (1e-48) to human gene CDCD2;CMD1E;HB1;IVF;LQT3;SCN5A;SSS1 (NP_001092875), a gene associated with Brugada syndrome 1, 601144 (3);Cardiomyopathy, dilated, 1E, 601154 (3);Heart block, nonprogressive, 113900 (3);Heart block, progressive, type IA, 113900 (3);Long QT syndrome-3, 603830 (3);Sick sinus syndrome 1, 608567 (3);Ventricular fibrillation, idiopathic, 603829 (3).
BioGrid reports that CG4894 interacts with CG2189 .
TRiP has 2 RNAi stocks for FBgn0001991 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001991 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	428 ± 10	4 of 4	14.60	Up
Head	75 ± 3	4 of 4	2.50	Up
Eye	292 ± 17	4 of 4	9.93	Up
Thoracicoabdominal ganglion	295 ± 7	4 of 4	10.00	Up
Salivary gland	10 ± 3	1 of 4	0.36	Down
Crop	71 ± 3	4 of 4	2.40	Up
Midgut	13 ± 2	0 of 4	0.40	Down
Tubule	4 ± 0	0 of 4	0.10	Down
Hindgut	53 ± 0	4 of 4	1.80	Up
Heart	119 ± 7	4 of 4	4.06	Up
Fat body	6 ± 4	0 of 4	0.21	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	22 ± 3	0 of 4	0.70	None
Male accessory glands	927 ± 66	4 of 4	31.50	Up
Virgin spermatheca	20 ± 1	4 of 4	0.70	None
Mated spermatheca	27 ± 5	4 of 4	0.94	None
Adult carcass	74 ± 4	4 of 4	2.50	Up
Larval CNS	91 ± 21	4 of 4	3.10	Up
Larval Salivary gland	6 ± 2	0 of 4	0.21	Down
Larval midgut	4 ± 2	0 of 4	0.15	Down
Larval tubule	3 ± 1	0 of 4	0.10	Down
Larval hindgut	20 ± 2	4 of 4	0.71	None
Larval fat body	5 ± 1	0 of 4	0.20	Down
Larval trachea	12 ± 6	1 of 4	0.43	Down
Larval carcass	91 ± 14	4 of 4	3.10	Up
S2 cells (growing)	1 ± 0	0 of 4	0.05	Down
Whole fly	29 ± 3	4 of 4

Looking for CG4894-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720