FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4905-RA through 18771 annotations produced 1 hits

Syntrophin-like 2 (Syn2):

Annotation Number : CG4905
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034135
Gbrowse : chr2R:12439764-12445988 (+) // 100.0 //
Probeset : 1639743_s_at
Accessions : protein= NP_523762; /// NP_725587; /// NP_725588; /// NP_725589; /// NP_788381;, nucleotide= NM_079038; /// NM_166179; /// NM_166180; /// NM_166181; /// NM_176201;
Pathway : 0016013 // syntrophin complex // inferred from sequence or structural similarity /// 0016013 // syntrophin complex // no
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0034135.
BDGP gene expression has embryonic in situ data for Syn2: 6 pix of staining in 1 body parts.
BioGrid reports that CG4905 interacts with CG9626 .
TRiP has 1 RNAi stocks for FBgn0034135 available for purchase.
VDRC has 1 RNAi stocks for FBgn0034135 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	626 ± 14	4 of 4	14.70	Up
Head	301 ± 19	4 of 4	7.10	Up
Eye	421 ± 28	4 of 4	9.89	Up
Thoracicoabdominal ganglion	769 ± 7	4 of 4	18.10	Up
Salivary gland	13 ± 4	1 of 4	0.32	Down
Crop	8 ± 1	2 of 4	0.20	Down
Midgut	26 ± 2	4 of 4	0.60	Down
Tubule	8 ± 0	1 of 4	0.20	Down
Hindgut	16 ± 2	4 of 4	0.40	Down
Heart	8 ± 0	4 of 4	0.19	Down
Fat body	11 ± 2	4 of 4	0.28	Down
Ovary	4 ± 0	1 of 4	0.10	Down
Testis	31 ± 0	4 of 4	0.70	None
Male accessory glands	19 ± 3	3 of 4	0.50	Down
Virgin spermatheca	10 ± 1	4 of 4	0.26	Down
Mated spermatheca	14 ± 1	4 of 4	0.35	Down
Adult carcass	52 ± 3	4 of 4	1.20	None
Larval CNS	137 ± 10	4 of 4	3.24	Up
Larval Salivary gland	8 ± 2	2 of 4	0.19	Down
Larval midgut	28 ± 1	4 of 4	0.66	Down
Larval tubule	3 ± 1	0 of 4	0.10	Down
Larval hindgut	7 ± 0	2 of 4	0.17	Down
Larval fat body	9 ± 0	1 of 4	0.20	Down
Larval trachea	10 ± 10	2 of 4	0.24	Down
Larval carcass	11 ± 2	3 of 4	0.28	Down
S2 cells (growing)	4 ± 0	2 of 4	0.12	Down
Whole fly	42 ± 4	4 of 4

Looking for CG4905-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720