FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4916-RA through 18771 annotations produced 1 hits

maternal expression at 31B (me31B):

Annotation Number : CG4916
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004419
Gbrowse : chr2L:10239325-10242175 (+) // 100.0 //
Probeset : 1628017_a_at
Accessions : protein= NP_523533; /// NP_723539;, nucleotide= NM_078809; /// NM_164898;
Pathway : 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005875 // microtubule associated complex
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0004419.
BDGP gene expression has embryonic in situ data for me31B: 4 pix of staining in 1 body parts.
BioGrid reports that CG4916 interacts with CG9890 CG8997 CG9796 .
TRiP has 3 RNAi stocks for FBgn0004419 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004419 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	394 ± 10	4 of 4	0.20	Down
Head	271 ± 11	4 of 4	0.10	Down
Eye	414 ± 13	4 of 4	0.22	Down
Thoracicoabdominal ganglion	340 ± 12	4 of 4	0.20	Down
Salivary gland	369 ± 22	4 of 4	0.20	Down
Crop	316 ± 8	4 of 4	0.20	Down
Midgut	342 ± 9	4 of 4	0.20	Down
Tubule	167 ± 18	4 of 4	0.10	Down
Hindgut	320 ± 11	4 of 4	0.20	Down
Heart	273 ± 10	4 of 4	0.14	Down
Fat body	281 ± 9	4 of 4	0.15	Down
Ovary	2760 ± 66	4 of 4	1.50	Up
Testis	416 ± 20	4 of 4	0.20	Down
Male accessory glands	421 ± 10	4 of 4	0.20	Down
Virgin spermatheca	152 ± 9	4 of 4	0.08	Down
Mated spermatheca	171 ± 12	4 of 4	0.09	Down
Adult carcass	284 ± 44	4 of 4	0.20	Down
Larval CNS	843 ± 35	4 of 4	0.45	Down
Larval Salivary gland	604 ± 19	4 of 4	0.32	Down
Larval midgut	342 ± 12	4 of 4	0.18	Down
Larval tubule	515 ± 11	4 of 4	0.30	Down
Larval hindgut	390 ± 2	4 of 4	0.21	Down
Larval fat body	510 ± 13	4 of 4	0.30	Down
Larval trachea	651 ± 59	4 of 4	0.34	Down
Larval carcass	560 ± 23	4 of 4	0.30	Down
S2 cells (growing)	572 ± 13	4 of 4	0.30	Down
Whole fly	1888 ± 93	4 of 4

Looking for CG4916-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720