FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4952-RA through 18771 annotations produced 1 hits

Dachshund (dac):

Annotation Number : CG4952
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005677
Gbrowse : chr2L:16466509-16485984 (-) // 100.0 //
Probeset : 1633341_s_at
Accessions : protein= NP_001014486; /// NP_001014487; /// NP_723968; /// NP_723969; /// NP_723970; /// NP_723971; /// NP_723972;, nucleotide= NM_001014486; /// NM_001014487; /// NM_165159; /// NM_165160; /// NM_165161; /// NM_165162; /// NM_165163;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003702 // RNA polymerase II transcription fact
FlyMine data for FBgn0005677.
BDGP gene expression has embryonic in situ data for dac: 24 pix of staining in 9 body parts.
BioGrid reports that CG4952 interacts with CG9554 CG9554 CG10798 CG9885 CG10079 CG4637 CG1464 CG1464 CG3938 .
TRiP has 2 RNAi stocks for FBgn0005677 available for purchase.
VDRC has 2 RNAi stocks for FBgn0005677 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	281 ± 5	4 of 4	24.80	Up
Head	59 ± 5	4 of 4	5.20	Up
Eye	88 ± 6	4 of 4	7.81	Up
Thoracicoabdominal ganglion	92 ± 3	4 of 4	8.20	Up
Salivary gland	8 ± 2	0 of 4	0.76	None
Crop	8 ± 2	1 of 4	0.70	None
Midgut	8 ± 0	1 of 4	0.70	None
Tubule	22 ± 9	2 of 4	2.00	None
Hindgut	44 ± 1	4 of 4	3.90	Up
Heart	3 ± 1	0 of 4	0.33	Down
Fat body	13 ± 3	0 of 4	1.16	None
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	7 ± 1	2 of 4	0.60	None
Male accessory glands	4 ± 1	0 of 4	0.40	Down
Virgin spermatheca	23 ± 2	4 of 4	2.10	Up
Mated spermatheca	34 ± 2	4 of 4	3.04	Up
Adult carcass	20 ± 3	0 of 4	1.80	None
Larval CNS	362 ± 62	4 of 4	31.84	Up
Larval Salivary gland	5 ± 1	0 of 4	0.51	Down
Larval midgut	5 ± 1	0 of 4	0.49	Down
Larval tubule	232 ± 28	4 of 4	20.50	Up
Larval hindgut	41 ± 2	4 of 4	3.64	Up
Larval fat body	3 ± 1	0 of 4	0.30	Down
Larval trachea	8 ± 4	2 of 4	0.75	None
Larval carcass	22 ± 3	3 of 4	1.94	Up
S2 cells (growing)	0 ± 0	0 of 4	0.07	Down
Whole fly	11 ± 1	3 of 4

Looking for CG4952-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720