FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4963-RA through 18771 annotations produced 1 hits

anon-fast-evolving-2H5 (mfrn):

Annotation Number : CG4963
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039561
Gbrowse : chr3R:23768510-23773731 (-) // 100.0 //
Probeset : 1632963_at
Accessions : protein= NP_651600;, nucleotide= NM_143343;
Pathway : 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotati
Interpro : 0005381 // iron ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005381 //
FlyMine data for FBgn0039561.
BDGP gene expression has embryonic in situ data for CG4963: 8 pix of staining in 1 body parts.
Homophila reports that CG4963 is a close match (8e-11) to human gene BMIQ4;UCP2 (NP_003346), a gene associated with {Obesity, susceptibility to, BMIQ4} (3).
BioGrid reports that CG4963 interacts with CG5363 CG6341 CG9277 .
TRiP has 1 RNAi stocks for FBgn0039561 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039561 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	541 ± 15	4 of 4	2.70	Up
Head	369 ± 15	4 of 4	1.80	Up
Eye	542 ± 16	4 of 4	2.71	Up
Thoracicoabdominal ganglion	559 ± 11	4 of 4	2.80	Up
Salivary gland	364 ± 12	4 of 4	1.82	Up
Crop	208 ± 3	4 of 4	1.00	None
Midgut	253 ± 4	4 of 4	1.30	Up
Tubule	699 ± 83	4 of 4	3.50	Up
Hindgut	184 ± 6	4 of 4	0.90	None
Heart	278 ± 10	4 of 4	1.39	Up
Fat body	195 ± 22	4 of 4	0.98	None
Ovary	186 ± 3	4 of 4	0.90	None
Testis	27 ± 1	4 of 4	0.10	Down
Male accessory glands	85 ± 5	4 of 4	0.40	Down
Virgin spermatheca	86 ± 8	4 of 4	0.43	Down
Mated spermatheca	113 ± 5	4 of 4	0.57	Down
Adult carcass	372 ± 9	4 of 4	1.90	Up
Larval CNS	257 ± 17	4 of 4	1.29	Up
Larval Salivary gland	231 ± 7	4 of 4	1.16	None
Larval midgut	268 ± 35	4 of 4	1.34	None
Larval tubule	385 ± 37	4 of 4	1.90	Up
Larval hindgut	274 ± 12	4 of 4	1.37	Up
Larval fat body	180 ± 13	4 of 4	0.90	None
Larval trachea	251 ± 17	4 of 4	1.26	Up
Larval carcass	219 ± 14	4 of 4	1.09	None
S2 cells (growing)	432 ± 7	4 of 4	2.16	Up
Whole fly	200 ± 11	4 of 4

Looking for CG4963-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720