FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4969-RA through 18771 annotations produced 1 hits

Wnt6 (Wnt6):

Annotation Number : CG4969
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031902
Gbrowse : chr2L:7350897-7352280 (+) // 100.0 //
Probeset : 1627979_at
Accessions : protein= NP_609108;, nucleotide= NM_135264;
Pathway : calcium modulating pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development /
Interpro : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
FlyMine data for FBgn0031902.
Homophila reports that CG4969 is a close match (1e-35) to human gene WNT10A (NP_079492), a gene associated with Odontoonychodermal dysplasia, 257980 (3).
BioGrid reports that CG4969 interacts with CG1916 CG4889 .
TRiP has 2 RNAi stocks for FBgn0031902 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031902 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	None
Head	27 ± 4	4 of 4	4.10	Up
Eye	52 ± 3	4 of 4	7.85	Up
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.10	None
Salivary gland	5 ± 2	0 of 4	0.76	None
Crop	10 ± 3	1 of 4	1.60	None
Midgut	11 ± 2	0 of 4	1.60	None
Tubule	19 ± 3	2 of 4	2.90	Up
Hindgut	14 ± 2	0 of 4	2.20	Up
Heart	1 ± 0	0 of 4	0.20	None
Fat body	0 ± 0	0 of 4	0.10	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	10 ± 1	0 of 4	1.50	None
Male accessory glands	2 ± 1	0 of 4	0.40	None
Virgin spermatheca	0 ± 0	0 of 4	0.10	None
Mated spermatheca	0 ± 0	0 of 4	0.08	None
Adult carcass	29 ± 3	4 of 4	4.40	Up
Larval CNS	2 ± 2	0 of 4	0.31	None
Larval Salivary gland	0 ± 0	0 of 4	0.10	None
Larval midgut	2 ± 0	0 of 4	0.30	None
Larval tubule	58 ± 8	4 of 4	8.70	Up
Larval hindgut	3 ± 0	0 of 4	0.52	None
Larval fat body	1 ± 0	0 of 4	0.20	None
Larval trachea	54 ± 8	4 of 4	8.06	Up
Larval carcass	7 ± 3	0 of 4	1.12	None
S2 cells (growing)	0 ± 0	0 of 4	0.13	None
Whole fly	6 ± 2	0 of 4

Looking for CG4969-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720