FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4976-RA through 18771 annotations produced 1 hits

Mes-4 (Mes-4):

Annotation Number : CG4976
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039559
Gbrowse : chr3R:23758703-23763571 (-) // 100.0 //
Probeset : 1631009_at
Accessions : protein= NP_733239;, nucleotide= NM_170360;
Pathway : 0000228 // nuclear chromosome // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from
Interpro : 0003712 // transcription cofactor activity // inferred from sequence or structural similarity /// 0005515 // protein bin
FlyMine data for FBgn0039559.
BDGP gene expression has embryonic in situ data for Mes-4: 16 pix of staining in 7 body parts.
Homophila reports that CG4976 is a close match (2e-13) to human gene EHMT1;EUHMTASE1 (NP_079033), a gene associated with Chromosome 9q subtelomeric deletion syndrome, 610253 (3).
TRiP has 1 RNAi stocks for FBgn0039559 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039559 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	38 ± 1	4 of 4	0.30	Down
Head	22 ± 3	4 of 4	0.20	Down
Eye	21 ± 2	4 of 4	0.16	Down
Thoracicoabdominal ganglion	33 ± 3	4 of 4	0.20	Down
Salivary gland	57 ± 9	2 of 4	0.41	Down
Crop	30 ± 3	4 of 4	0.20	Down
Midgut	23 ± 1	3 of 4	0.20	Down
Tubule	62 ± 4	4 of 4	0.50	Down
Hindgut	19 ± 0	3 of 4	0.10	Down
Heart	29 ± 2	4 of 4	0.21	Down
Fat body	19 ± 2	4 of 4	0.14	Down
Ovary	399 ± 4	4 of 4	2.90	Up
Testis	89 ± 4	4 of 4	0.70	Down
Male accessory glands	54 ± 5	4 of 4	0.40	Down
Virgin spermatheca	30 ± 2	4 of 4	0.22	Down
Mated spermatheca	30 ± 3	4 of 4	0.22	Down
Adult carcass	31 ± 4	2 of 4	0.20	Down
Larval CNS	127 ± 3	4 of 4	0.93	None
Larval Salivary gland	137 ± 7	4 of 4	1.00	None
Larval midgut	28 ± 3	3 of 4	0.21	Down
Larval tubule	51 ± 1	4 of 4	0.40	Down
Larval hindgut	39 ± 4	4 of 4	0.29	Down
Larval fat body	56 ± 7	4 of 4	0.40	Down
Larval trachea	76 ± 6	4 of 4	0.56	Down
Larval carcass	41 ± 3	4 of 4	0.30	Down
S2 cells (growing)	146 ± 6	4 of 4	1.07	None
Whole fly	137 ± 9	4 of 4

Looking for CG4976-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720