FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4994-RA through 18771 annotations produced 1 hits

Mitochondrial phophate carrier protein (Mpcp):

Annotation Number : CG4994
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026409
Gbrowse : chr3L:14530717-14533546 (+) // 100.0 //
Probeset : 1637525_s_at
Accessions : protein= NP_524069; /// NP_729978;, nucleotide= NM_079345; /// NM_168588;
Pathway : 0005739 // mitochondrion // non-traceable author statement /// 0005740 // mitochondrial envelope // inferred from sequen
Interpro : 0005488 // binding // inferred from electronic annotation /// 0015114 // phosphate transmembrane transporter activity //
FlyMine data for FBgn0026409.
BDGP gene expression has embryonic in situ data for Mpcp: 10 pix of staining in 13 body parts.
Homophila reports that CG4994 is a close match (2e-15) to human gene DNC;MCPHA;MUP1;SLC25A19 (NP_068380), a gene associated with Microcephaly, Amish type, 607196 (3).
BioGrid reports that CG4994 interacts with CG7056 CG7113 CG7610 CG8316 .
VDRC has 2 RNAi stocks for FBgn0026409 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2873 ± 67	4 of 4	1.20	Up
Head	3528 ± 56	4 of 4	1.50	Up
Eye	5661 ± 43	4 of 4	2.40	Up
Thoracicoabdominal ganglion	4006 ± 163	4 of 4	1.70	Up
Salivary gland	9268 ± 249	4 of 4	3.93	Up
Crop	3433 ± 176	4 of 4	1.50	Up
Midgut	3551 ± 130	4 of 4	1.50	Up
Tubule	6342 ± 146	4 of 4	2.70	Up
Hindgut	4230 ± 113	4 of 4	1.80	Up
Heart	4268 ± 273	4 of 4	1.81	Up
Fat body	4701 ± 391	4 of 4	2.00	Up
Ovary	1889 ± 21	4 of 4	0.80	Down
Testis	911 ± 22	4 of 4	0.40	Down
Male accessory glands	3917 ± 70	4 of 4	1.70	Up
Virgin spermatheca	5013 ± 63	4 of 4	2.13	Up
Mated spermatheca	4727 ± 99	4 of 4	2.01	Up
Adult carcass	3672 ± 81	4 of 4	1.60	Up
Larval CNS	1919 ± 76	4 of 4	0.81	Down
Larval Salivary gland	3216 ± 232	4 of 4	1.37	Up
Larval midgut	4633 ± 81	4 of 4	1.97	Up
Larval tubule	3326 ± 195	4 of 4	1.40	Up
Larval hindgut	4328 ± 46	4 of 4	1.84	Up
Larval fat body	1860 ± 178	4 of 4	0.80	None
Larval trachea	2557 ± 131	4 of 4	1.09	None
Larval carcass	2628 ± 167	4 of 4	1.12	None
S2 cells (growing)	2735 ± 27	4 of 4	1.16	Up
Whole fly	2356 ± 61	4 of 4

Looking for CG4994-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720