FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5020-RB through 18771 annotations produced 1 hits

cytoplasmic linker protein 190 (CLIP-190):

Annotation Number : CG5020
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020503
Gbrowse : chr2L:17384739-17409699 (+) // 100.0 //
Probeset : 1634712_s_at
Accessions : protein= NP_001036366; /// NP_001036367; /// NP_001137833; /// NP_001137834; /// NP_001162996; /// NP_001162997; /// NP_609835; /// NP_724047; /// NP_724048; /// NP_788072;, nucleotide= NM_001042901; /// NM_001042902; /// NM_001144361; /// NM_001144362; /// NM_001169525; /// NM_001169526; /// NM_135991; /// NM_165213; /// NM_165214; /// NM_176058;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay
Interpro : 0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotati
FlyMine data for FBgn0020503.
BDGP gene expression has embryonic in situ data for CLIP-190: 4 pix of staining in 1 body parts.
Homophila reports that CG5020 is a close match (6e-11) to human gene CMD1S;CMH1;MPD1;MYH7;SPMD;SPMM (NP_000248), a gene associated with Cardiomyopathy, dilated, 1S (3);Cardiomyopathy, familial hypertrophic, 1, 192600 (3);Myopathy, Laing distal, 160500 (3);Myopathy, myosin storage, 608358 (3);Scapuloperoneal syndrome, myopathic type, 181430 (3).
BioGrid reports that CG5020 interacts with CG5695 .
TRiP has 1 RNAi stocks for FBgn0020503 available for purchase.
VDRC has 1 RNAi stocks for FBgn0020503 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	302 ± 7	4 of 4	2.30	Up
Head	177 ± 4	4 of 4	1.40	Up
Eye	159 ± 8	4 of 4	1.23	Up
Thoracicoabdominal ganglion	295 ± 10	4 of 4	2.30	Up
Salivary gland	227 ± 8	4 of 4	1.76	Up
Crop	149 ± 8	4 of 4	1.20	None
Midgut	160 ± 3	4 of 4	1.20	Up
Tubule	198 ± 7	4 of 4	1.50	Up
Hindgut	257 ± 5	4 of 4	2.00	Up
Heart	180 ± 4	4 of 4	1.39	Up
Fat body	223 ± 22	4 of 4	1.73	Up
Ovary	150 ± 2	4 of 4	1.20	None
Testis	606 ± 17	4 of 4	4.70	Up
Male accessory glands	144 ± 3	4 of 4	1.10	None
Virgin spermatheca	137 ± 4	4 of 4	1.06	None
Mated spermatheca	156 ± 7	4 of 4	1.21	None
Adult carcass	184 ± 9	4 of 4	1.40	Up
Larval CNS	154 ± 6	4 of 4	1.20	Up
Larval Salivary gland	204 ± 14	4 of 4	1.58	Up
Larval midgut	105 ± 2	4 of 4	0.82	None
Larval tubule	149 ± 3	4 of 4	1.20	None
Larval hindgut	131 ± 2	4 of 4	1.01	None
Larval fat body	106 ± 34	4 of 4	0.80	None
Larval trachea	93 ± 8	4 of 4	0.72	Down
Larval carcass	136 ± 7	4 of 4	1.06	None
S2 cells (growing)	128 ± 4	4 of 4	0.99	None
Whole fly	129 ± 8	4 of 4

Looking for CG5020-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720