FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5028-RA through 18771 annotations produced 1 hits

(CG5028):

Annotation Number : CG5028
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039358
Gbrowse : chr3R:21506539-21508886 (+) // 100.0 //
Probeset : 1629691_at
Accessions : protein= NP_001097922; /// NP_001097923; /// NP_001097924; /// NP_001097925; /// NP_651416;, nucleotide= NM_001104452; /// NM_001104453; /// NM_001104454; /// NM_001104455; /// NM_143159;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred fro
Interpro : "0000287 // magnesium ion binding // inferred from electronic annotation /// 0004449 // isocitrate dehydrogenase (NAD+)
FlyMine data for FBgn0039358.
VDRC has 4 RNAi stocks for FBgn0039358 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	815 ± 16	4 of 4	1.10	None
Head	864 ± 77	4 of 4	1.20	None
Eye	1414 ± 45	4 of 4	1.96	Up
Thoracicoabdominal ganglion	1029 ± 28	4 of 4	1.40	Up
Salivary gland	579 ± 84	4 of 4	0.80	None
Crop	596 ± 12	4 of 4	0.80	None
Midgut	302 ± 18	4 of 4	0.40	Down
Tubule	442 ± 17	4 of 4	0.60	Down
Hindgut	950 ± 23	4 of 4	1.30	Up
Heart	758 ± 12	4 of 4	1.05	None
Fat body	540 ± 65	4 of 4	0.75	Down
Ovary	291 ± 14	4 of 4	0.40	Down
Testis	86 ± 3	4 of 4	0.10	Down
Male accessory glands	154 ± 4	4 of 4	0.20	Down
Virgin spermatheca	309 ± 24	2 of 4	0.43	Down
Mated spermatheca	266 ± 13	3 of 4	0.37	Down
Adult carcass	1653 ± 78	4 of 4	2.30	Up
Larval CNS	387 ± 51	4 of 4	0.54	Down
Larval Salivary gland	261 ± 17	4 of 4	0.36	Down
Larval midgut	265 ± 19	4 of 4	0.37	Down
Larval tubule	342 ± 34	4 of 4	0.50	Down
Larval hindgut	747 ± 41	4 of 4	1.04	None
Larval fat body	122 ± 13	4 of 4	0.20	Down
Larval trachea	250 ± 34	4 of 4	0.35	Down
Larval carcass	984 ± 60	4 of 4	1.36	Up
S2 cells (growing)	431 ± 3	4 of 4	0.60	Down
Whole fly	722 ± 60	4 of 4

Looking for CG5028-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720