FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5087-RA through 18771 annotations produced 1 hits

(CG5087):

Annotation Number : CG5087
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035953
Gbrowse : chr3L:8991285-8995666 (+) // 100.0 //
Probeset : 1623955_at
Accessions : protein= NP_648279;, nucleotide= NM_140022;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin
FlyMine data for FBgn0035953.
BDGP gene expression has embryonic in situ data for CG5087: 12 pix of staining in 5 body parts.
Homophila reports that CG5087 is a close match (4e-15) to human gene HERC2;SHEP1 (NP_004658), a gene associated with [Skin/hair/eye pigmentation 1, blond/brown hair], 227220 (3);[Skin/hair/eye pigmentation 1, blue/nonblue eyes], 227220 (3).
BioGrid reports that CG5087 interacts with CG5108 CG8472 .
VDRC has 2 RNAi stocks for FBgn0035953 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	130 ± 3	4 of 4	1.60	Up
Head	87 ± 1	4 of 4	1.10	None
Eye	100 ± 6	4 of 4	1.21	None
Thoracicoabdominal ganglion	108 ± 4	4 of 4	1.30	Up
Salivary gland	129 ± 6	4 of 4	1.56	Up
Crop	103 ± 1	4 of 4	1.20	Up
Midgut	98 ± 3	4 of 4	1.20	Up
Tubule	78 ± 0	4 of 4	0.90	Down
Hindgut	90 ± 3	4 of 4	1.10	None
Heart	87 ± 3	4 of 4	1.05	None
Fat body	86 ± 7	4 of 4	1.04	None
Ovary	171 ± 2	4 of 4	2.10	Up
Testis	68 ± 1	4 of 4	0.80	Down
Male accessory glands	106 ± 4	4 of 4	1.30	Up
Virgin spermatheca	83 ± 3	4 of 4	1.00	None
Mated spermatheca	78 ± 3	4 of 4	0.94	None
Adult carcass	102 ± 8	4 of 4	1.20	None
Larval CNS	100 ± 6	4 of 4	1.21	Up
Larval Salivary gland	106 ± 4	4 of 4	1.28	Up
Larval midgut	113 ± 5	4 of 4	1.37	Up
Larval tubule	100 ± 3	4 of 4	1.20	Up
Larval hindgut	126 ± 7	4 of 4	1.52	Up
Larval fat body	55 ± 3	4 of 4	0.70	Down
Larval trachea	79 ± 11	4 of 4	0.96	None
Larval carcass	83 ± 5	4 of 4	1.01	None
S2 cells (growing)	118 ± 2	4 of 4	1.42	Up
Whole fly	83 ± 1	4 of 4

Looking for CG5087-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720