FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5093-RA through 18771 annotations produced 1 hits

Dorsocross3 (Doc3):

Annotation Number : CG5093
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035954
Gbrowse : chr3L:8998297-9000351 (+) // 100.0 //
Probeset : 1629459_at
Accessions : protein= NP_648280;, nucleotide= NM_140023;
Pathway : DNA-dependent // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from mutan
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
FlyMine data for FBgn0035954.
BDGP gene expression has embryonic in situ data for Doc3: 70 pix of staining in 27 body parts.
Homophila reports that CG5093 is a close match (4e-32) to human gene CPX;TBX22 (NP_001103349), a gene associated with Cleft palate with ankyloglossia, 303400 (3).
BioGrid reports that CG5093 interacts with CG8548 .
TRiP has 1 RNAi stocks for FBgn0035954 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035954 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.30	Down
Head	5 ± 1	0 of 4	0.50	None
Eye	3 ± 1	0 of 4	0.38	Down
Thoracicoabdominal ganglion	5 ± 1	0 of 4	0.50	None
Salivary gland	25 ± 5	0 of 4	2.40	None
Crop	7 ± 2	0 of 4	0.70	None
Midgut	4 ± 1	0 of 4	0.40	Down
Tubule	65 ± 34	2 of 4	6.30	None
Hindgut	51 ± 4	4 of 4	4.90	Up
Heart	33 ± 3	4 of 4	3.24	Up
Fat body	7 ± 1	1 of 4	0.68	None
Ovary	5 ± 0	0 of 4	0.50	None
Testis	10 ± 0	2 of 4	1.00	None
Male accessory glands	2 ± 1	0 of 4	0.30	Down
Virgin spermatheca	4 ± 1	0 of 4	0.46	None
Mated spermatheca	4 ± 1	0 of 4	0.42	Down
Adult carcass	13 ± 2	1 of 4	1.20	None
Larval CNS	14 ± 3	4 of 4	1.34	None
Larval Salivary gland	9 ± 2	1 of 4	0.91	None
Larval midgut	3 ± 0	0 of 4	0.31	Down
Larval tubule	64 ± 3	4 of 4	6.20	Up
Larval hindgut	35 ± 1	4 of 4	3.40	Up
Larval fat body	11 ± 2	0 of 4	1.10	None
Larval trachea	7 ± 0	0 of 4	0.72	None
Larval carcass	25 ± 2	3 of 4	2.43	Up
S2 cells (growing)	7 ± 0	0 of 4	0.72	None
Whole fly	10 ± 1	2 of 4

Looking for CG5093-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720