FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5179-RA through 18771 annotations produced 1 hits

Cyclin-dependent kinase9 2.7 (Cdk9):

Annotation Number : CG5179
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0019949
Gbrowse : chr2R:18523567-18525228 (-) // 100.0 //
Probeset : 1629487_at
Accessions : protein= NP_477226;, nucleotide= NM_057878;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005700 // polytene chromosome // inferred from direct assay /// 00
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activi
FlyMine data for FBgn0019949.
BDGP gene expression has embryonic in situ data for Cdk9: 4 pix of staining in 1 body parts.
Homophila reports that CG5179 is a close match (9e-11) to human gene SRK;STD;ZAP70 (NP_997402), a gene associated with Selective T-cell defect (3).
BioGrid reports that CG5179 interacts with CG6292 .
TRiP has 3 RNAi stocks for FBgn0019949 available for purchase.
VDRC has 3 RNAi stocks for FBgn0019949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	154 ± 2	4 of 4	1.20	None
Head	86 ± 5	4 of 4	0.70	Down
Eye	147 ± 4	4 of 4	1.19	None
Thoracicoabdominal ganglion	163 ± 3	4 of 4	1.30	Up
Salivary gland	103 ± 15	4 of 4	0.83	None
Crop	98 ± 1	4 of 4	0.80	Down
Midgut	83 ± 3	4 of 4	0.70	Down
Tubule	129 ± 4	4 of 4	1.00	None
Hindgut	94 ± 2	4 of 4	0.80	Down
Heart	91 ± 4	4 of 4	0.73	Down
Fat body	94 ± 9	4 of 4	0.76	Down
Ovary	243 ± 3	4 of 4	2.00	Up
Testis	120 ± 7	4 of 4	1.00	None
Male accessory glands	130 ± 5	4 of 4	1.00	None
Virgin spermatheca	91 ± 6	4 of 4	0.74	Down
Mated spermatheca	77 ± 1	4 of 4	0.62	Down
Adult carcass	80 ± 2	4 of 4	0.60	Down
Larval CNS	228 ± 9	4 of 4	1.84	Up
Larval Salivary gland	217 ± 5	4 of 4	1.75	Up
Larval midgut	76 ± 4	4 of 4	0.62	Down
Larval tubule	211 ± 3	4 of 4	1.70	Up
Larval hindgut	124 ± 5	4 of 4	1.00	None
Larval fat body	140 ± 4	4 of 4	1.10	None
Larval trachea	158 ± 10	4 of 4	1.27	Up
Larval carcass	108 ± 10	4 of 4	0.87	None
S2 cells (growing)	214 ± 3	4 of 4	1.72	Up
Whole fly	124 ± 8	4 of 4

Looking for CG5179-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720