FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5229-RA through 18771 annotations produced 1 hits

chameau (chm):

Annotation Number : CG5229
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028387
Gbrowse : chr2L:7412452-7422389 (+) // 100.0 //
Probeset : 1631863_at
Accessions : protein= NP_609117;, nucleotide= NM_135273;
Pathway : DNA-dependent // inferred from electronic annotation /// 0016458 // gene silencing // inferred from genetic interaction
Interpro : 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0028387.
BDGP gene expression has embryonic in situ data for chm: 4 pix of staining in 1 body parts.
BioGrid reports that CG5229 interacts with CG11648 CG32443 CG18412 .
TRiP has 3 RNAi stocks for FBgn0028387 available for purchase.
VDRC has 2 RNAi stocks for FBgn0028387 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	76 ± 5	4 of 4	1.30	Up
Head	30 ± 3	4 of 4	0.50	Down
Eye	29 ± 0	4 of 4	0.51	Down
Thoracicoabdominal ganglion	51 ± 3	4 of 4	0.90	None
Salivary gland	44 ± 3	4 of 4	0.77	None
Crop	44 ± 1	4 of 4	0.80	None
Midgut	32 ± 2	0 of 4	0.60	Down
Tubule	28 ± 1	4 of 4	0.50	Down
Hindgut	26 ± 3	3 of 4	0.50	Down
Heart	19 ± 1	4 of 4	0.33	Down
Fat body	23 ± 6	4 of 4	0.40	Down
Ovary	137 ± 4	4 of 4	2.40	Up
Testis	44 ± 0	4 of 4	0.80	None
Male accessory glands	23 ± 2	2 of 4	0.40	Down
Virgin spermatheca	32 ± 2	4 of 4	0.56	Down
Mated spermatheca	40 ± 5	4 of 4	0.70	None
Adult carcass	39 ± 3	4 of 4	0.70	Down
Larval CNS	90 ± 5	4 of 4	1.57	Up
Larval Salivary gland	34 ± 2	4 of 4	0.59	Down
Larval midgut	26 ± 1	4 of 4	0.47	Down
Larval tubule	32 ± 1	4 of 4	0.60	Down
Larval hindgut	20 ± 0	1 of 4	0.35	Down
Larval fat body	38 ± 2	3 of 4	0.70	Down
Larval trachea	44 ± 2	4 of 4	0.77	None
Larval carcass	27 ± 1	4 of 4	0.47	Down
S2 cells (growing)	53 ± 1	4 of 4	0.92	None
Whole fly	57 ± 5	4 of 4

Looking for CG5229-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720