FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5247-RA through 18771 annotations produced 1 hits

Yolk protein factor 1b (Irbp):

Annotation Number : CG5247
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011774
Gbrowse : chr3R:7235770-7238162 (+) // 99.63 //
Probeset : 1640431_at
Accessions : protein= NP_536773;, nucleotide= NM_080512;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct
FlyMine data for FBgn0011774.
BDGP gene expression has embryonic in situ data for Irbp: 4 pix of staining in 1 body parts.
BioGrid reports that CG5247 interacts with CG6920 CG6920 CG5825 CG32045 CG6521 CG1126 .
TRiP has 2 RNAi stocks for FBgn0011774 available for purchase.
VDRC has 2 RNAi stocks for FBgn0011774 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	32 ± 1	4 of 4	0.30	Down
Head	34 ± 4	4 of 4	0.30	Down
Eye	34 ± 1	4 of 4	0.31	Down
Thoracicoabdominal ganglion	50 ± 3	4 of 4	0.50	Down
Salivary gland	32 ± 3	0 of 4	0.30	Down
Crop	38 ± 2	4 of 4	0.30	Down
Midgut	51 ± 3	4 of 4	0.50	Down
Tubule	72 ± 8	4 of 4	0.70	Down
Hindgut	38 ± 2	4 of 4	0.40	Down
Heart	34 ± 3	4 of 4	0.31	Down
Fat body	33 ± 5	3 of 4	0.31	Down
Ovary	268 ± 9	4 of 4	2.50	Up
Testis	16 ± 1	3 of 4	0.20	Down
Male accessory glands	40 ± 4	4 of 4	0.40	Down
Virgin spermatheca	26 ± 2	2 of 4	0.24	Down
Mated spermatheca	29 ± 2	3 of 4	0.27	Down
Adult carcass	29 ± 4	2 of 4	0.30	Down
Larval CNS	65 ± 6	4 of 4	0.60	Down
Larval Salivary gland	39 ± 1	4 of 4	0.36	Down
Larval midgut	31 ± 0	4 of 4	0.29	Down
Larval tubule	59 ± 7	4 of 4	0.50	Down
Larval hindgut	39 ± 1	4 of 4	0.36	Down
Larval fat body	18 ± 2	4 of 4	0.20	Down
Larval trachea	64 ± 7	4 of 4	0.59	Down
Larval carcass	37 ± 5	4 of 4	0.34	Down
S2 cells (growing)	115 ± 2	4 of 4	1.06	None
Whole fly	109 ± 8	4 of 4

Looking for CG5247-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720