FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5336-RA through 18771 annotations produced 1 hits

Ced-12 (Ced-12):

Annotation Number : CG5336
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032409
Gbrowse : chr2L:12097842-12100839 (+) // 100.0 //
Probeset : 1626390_at
Accessions : protein= NP_609548;, nucleotide= NM_135704;
Pathway : 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0032409.
BDGP gene expression has embryonic in situ data for Ced-12: 4 pix of staining in 1 body parts.
TRiP has 2 RNAi stocks for FBgn0032409 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032409 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	145 ± 4	4 of 4	1.70	Up
Head	91 ± 3	4 of 4	1.10	None
Eye	72 ± 2	4 of 4	0.85	None
Thoracicoabdominal ganglion	146 ± 4	4 of 4	1.70	Up
Salivary gland	52 ± 6	0 of 4	0.62	Down
Crop	75 ± 1	4 of 4	0.90	None
Midgut	91 ± 5	4 of 4	1.10	None
Tubule	66 ± 2	4 of 4	0.80	Down
Hindgut	65 ± 3	4 of 4	0.80	Down
Heart	57 ± 3	4 of 4	0.68	Down
Fat body	43 ± 5	4 of 4	0.51	Down
Ovary	216 ± 5	4 of 4	2.50	Up
Testis	37 ± 1	4 of 4	0.40	Down
Male accessory glands	39 ± 5	4 of 4	0.50	Down
Virgin spermatheca	34 ± 2	4 of 4	0.41	Down
Mated spermatheca	34 ± 0	4 of 4	0.40	Down
Adult carcass	51 ± 4	3 of 4	0.60	Down
Larval CNS	155 ± 7	4 of 4	1.83	Up
Larval Salivary gland	32 ± 1	4 of 4	0.38	Down
Larval midgut	99 ± 1	4 of 4	1.17	Up
Larval tubule	107 ± 1	4 of 4	1.30	Up
Larval hindgut	99 ± 4	4 of 4	1.16	None
Larval fat body	83 ± 3	4 of 4	1.00	None
Larval trachea	97 ± 10	4 of 4	1.14	None
Larval carcass	60 ± 2	4 of 4	0.71	Down
S2 cells (growing)	307 ± 3	4 of 4	3.62	Up
Whole fly	85 ± 4	4 of 4

Looking for CG5336-RA. 1 entries matched from 18771, in 3 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720