FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5389-RA through 18771 annotations produced 1 hits

ATP synthase Beta chain (CG5389):

Annotation Number : CG5389
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036568
Gbrowse : chr3L:16090933-16093190 (+) // 100.0 //
Probeset : 1640920_at
Accessions : protein= NP_648836;, nucleotide= NM_140579;
Pathway : "0000275 // mitochondrial proton-transporting ATP synthase complex
Interpro : catalytic core F(1) // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from d
FlyMine data for FBgn0036568.
BDGP gene expression has embryonic in situ data for CG5389: 8 pix of staining in 1 body parts.
Homophila reports that CG5389 is a close match (1e-19) to human gene ATP6B1;VPP3 (NP_001683), a gene associated with Renal tubular acidosis with deafness, 267300 (3).
VDRC has 3 RNAi stocks for FBgn0036568 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	0 of 4	0.20	Down
Head	9 ± 1	0 of 4	0.30	Down
Eye	4 ± 1	1 of 4	0.16	Down
Thoracicoabdominal ganglion	7 ± 1	0 of 4	0.30	Down
Salivary gland	22 ± 7	0 of 4	0.77	None
Crop	9 ± 1	0 of 4	0.30	Down
Midgut	14 ± 2	0 of 4	0.50	Down
Tubule	9 ± 0	1 of 4	0.30	Down
Hindgut	14 ± 2	2 of 4	0.50	Down
Heart	3 ± 0	0 of 4	0.12	Down
Fat body	18 ± 6	1 of 4	0.62	Down
Ovary	6 ± 1	1 of 4	0.20	Down
Testis	209 ± 12	4 of 4	7.10	Up
Male accessory glands	10 ± 1	0 of 4	0.40	Down
Virgin spermatheca	9 ± 2	0 of 4	0.32	Down
Mated spermatheca	11 ± 1	0 of 4	0.40	Down
Adult carcass	24 ± 2	2 of 4	0.80	None
Larval CNS	5 ± 1	1 of 4	0.20	Down
Larval Salivary gland	12 ± 1	1 of 4	0.41	Down
Larval midgut	19 ± 0	4 of 4	0.65	Down
Larval tubule	8 ± 1	0 of 4	0.30	Down
Larval hindgut	10 ± 1	3 of 4	0.36	Down
Larval fat body	59 ± 14	3 of 4	2.00	None
Larval trachea	2 ± 2	0 of 4	0.09	Down
Larval carcass	6 ± 2	0 of 4	0.22	Down
S2 cells (growing)	6 ± 2	0 of 4	0.23	Down
Whole fly	29 ± 0	4 of 4

Looking for CG5389-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720