FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5393-RB through 18771 annotations produced 1 hits

tracheae defective (apt):

Annotation Number : CG5393
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015903
Gbrowse : chr2R:19452419-19487223 (+) // 100.0 //
Probeset : 1625844_s_at
Accessions : protein= NP_477179; /// NP_477180; /// NP_726342; /// NP_726343; /// NP_726344;, nucleotide= NM_057831; /// NM_057832; /// NM_166609; /// NM_166610; /// NM_166611;
Pathway : open tracheal system // traceable author statement /// 0007507 // heart development // traceable author statement /// 0
Interpro : 0005634 // nucleus // inferred from direct assay
FlyMine data for FBgn0015903.
BDGP gene expression has embryonic in situ data for apt: 128 pix of staining in 44 body parts.
BioGrid reports that CG5393 interacts with CG5393 CG6766 CG8274 CG8997 CG9983 CG2189 CG2189 CG5829 .
TRiP has 1 RNAi stocks for FBgn0015903 available for purchase.
VDRC has 2 RNAi stocks for FBgn0015903 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 1	3 of 4	0.20	Down
Head	15 ± 0	2 of 4	0.20	Down
Eye	13 ± 2	0 of 4	0.17	Down
Thoracicoabdominal ganglion	22 ± 2	3 of 4	0.30	Down
Salivary gland	28 ± 2	1 of 4	0.36	Down
Crop	16 ± 1	1 of 4	0.20	Down
Midgut	40 ± 1	4 of 4	0.50	Down
Tubule	33 ± 1	3 of 4	0.40	Down
Hindgut	36 ± 5	3 of 4	0.50	Down
Heart	15 ± 4	2 of 4	0.20	Down
Fat body	22 ± 4	3 of 4	0.28	Down
Ovary	48 ± 1	4 of 4	0.60	Down
Testis	80 ± 6	4 of 4	1.00	None
Male accessory glands	22 ± 4	1 of 4	0.30	Down
Virgin spermatheca	25 ± 3	4 of 4	0.33	Down
Mated spermatheca	30 ± 3	4 of 4	0.39	Down
Adult carcass	30 ± 4	3 of 4	0.40	Down
Larval CNS	38 ± 8	4 of 4	0.50	Down
Larval Salivary gland	14 ± 1	1 of 4	0.18	Down
Larval midgut	32 ± 4	4 of 4	0.41	Down
Larval tubule	28 ± 1	4 of 4	0.40	Down
Larval hindgut	29 ± 3	4 of 4	0.38	Down
Larval fat body	34 ± 5	2 of 4	0.40	Down
Larval trachea	90 ± 12	4 of 4	1.17	None
Larval carcass	18 ± 1	1 of 4	0.24	Down
S2 cells (growing)	20 ± 1	2 of 4	0.26	Down
Whole fly	77 ± 3	4 of 4

Looking for CG5393-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720