FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5397-RA through 18771 annotations produced 1 hits

(CG5397):

Annotation Number : CG5397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031327
Gbrowse : chr2L:1240037-1242205 (+) // 100.0 //
Probeset : 1638892_at
Accessions : protein= NP_608591;, nucleotide= NM_134747;
Interpro : 0004772 // sterol O-acyltransferase activity // inferred from sequence or structural similarity /// 0008415 // acyltrans
FlyMine data for FBgn0031327.
BDGP gene expression has embryonic in situ data for CG5397: 7 pix of staining in 3 body parts.
Homophila reports that CG5397 is a close match (4e-18) to human gene AITD3;TG (NP_003226), a gene associated with Goiter, adolescent multinodular (1);Goiter, nonendemic, simple (3);Hypothyroidism, hereditary congenital (3);{Autoimmune thyroid disease, susceptibility to 3}, 608175 (3).
BioGrid reports that CG5397 interacts with CG5848 .
VDRC has 2 RNAi stocks for FBgn0031327 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	29 ± 2	4 of 4	0.40	Down
Head	331 ± 21	4 of 4	4.40	Up
Eye	190 ± 13	4 of 4	2.54	Up
Thoracicoabdominal ganglion	15 ± 2	3 of 4	0.20	Down
Salivary gland	38 ± 10	3 of 4	0.51	Down
Crop	14 ± 1	3 of 4	0.20	Down
Midgut	12 ± 2	0 of 4	0.20	Down
Tubule	7 ± 0	0 of 4	0.10	Down
Hindgut	21 ± 2	4 of 4	0.30	Down
Heart	202 ± 6	4 of 4	2.70	Up
Fat body	29 ± 5	4 of 4	0.39	Down
Ovary	7 ± 1	3 of 4	0.10	Down
Testis	16 ± 1	4 of 4	0.20	Down
Male accessory glands	32 ± 9	4 of 4	0.40	Down
Virgin spermatheca	23 ± 0	4 of 4	0.32	Down
Mated spermatheca	21 ± 1	4 of 4	0.29	Down
Adult carcass	458 ± 38	4 of 4	6.10	Up
Larval CNS	15 ± 1	4 of 4	0.21	Down
Larval Salivary gland	38 ± 1	4 of 4	0.51	Down
Larval midgut	29 ± 2	4 of 4	0.40	Down
Larval tubule	18 ± 3	4 of 4	0.20	Down
Larval hindgut	44 ± 4	4 of 4	0.59	Down
Larval fat body	35 ± 8	4 of 4	0.50	Down
Larval trachea	1972 ± 114	4 of 4	26.30	Up
Larval carcass	254 ± 24	4 of 4	3.40	Up
S2 cells (growing)	53 ± 4	4 of 4	0.72	Down
Whole fly	75 ± 4	4 of 4

Looking for CG5397-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720