Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG5432-RA through 18771 annotations produced 1 hits


/// delilah (CG5432 /// dei):

Annotation Number : CG5432
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039425
Gbrowse : chr3R:22239809-22241111 (+) // 100.0 //
Probeset : 1623273_at
Accessions : protein= NP_524516; /// NP_651476;, nucleotide= NM_079792; /// NM_143219;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription
FlyMine data for FBgn0039425.
Homophila reports that CG5432 is a close match (1e-97) to human gene ALDOB (NP_000026), a gene associated with Fructose intolerance (3).
VDRC has 2 RNAi stocks for FBgn0039425 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head2 ± 10 of 4 0.10Down
Eye2 ± 10 of 4 0.06Down
Thoracicoabdominal ganglion3 ± 00 of 4 0.10Down
Salivary gland4 ± 10 of 4 0.10Down
Crop1 ± 00 of 4 0.00Down
Midgut1 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.10Down
Hindgut5 ± 10 of 4 0.10Down
Heart2 ± 11 of 4 0.06Down
Fat body3 ± 20 of 4 0.08Down
Ovary0 ± 00 of 4 0.00Down
Testis493 ± 204 of 411.00Up
Male accessory glands7 ± 30 of 4 0.20Down
Virgin spermatheca2 ± 10 of 4 0.05Down
Mated spermatheca1 ± 00 of 4 0.03Down
Adult carcass6 ± 22 of 4 0.10Down
Larval CNS1 ± 00 of 4 0.03Down
Larval Salivary gland3 ± 10 of 4 0.08Down
Larval midgut1 ± 00 of 4 0.03Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut5 ± 00 of 4 0.13Down
Larval fat body34 ± 194 of 4 0.80None
Larval trachea2 ± 10 of 4 0.06Down
Larval carcass4 ± 20 of 4 0.11Down
S2 cells (growing)1 ± 00 of 4 0.03Down
Whole fly45 ± 74 of 4

Looking for CG5432-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime