FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5474-RA through 18771 annotations produced 1 hits

Signal sequence receptor beta (SsRbeta):

Annotation Number : CG5474
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011016
Gbrowse : chr3L:16122739-16124086 (+) // 100.0 //
Probeset : 1634773_at
Accessions : protein= NP_524103;, nucleotide= NM_079379;
Pathway : "0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005786 // signal recognition particle
Interpro : endoplasmic reticulum targeting // inferred from sequence or structural similarity /// 0005811 // lipid particle // inf
FlyMine data for FBgn0011016.
VDRC has 1 RNAi stocks for FBgn0011016 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	348 ± 8	4 of 4	0.70	Down
Head	431 ± 27	4 of 4	0.80	None
Eye	531 ± 18	4 of 4	1.04	None
Thoracicoabdominal ganglion	264 ± 14	4 of 4	0.50	Down
Salivary gland	1391 ± 75	4 of 4	2.71	Up
Crop	355 ± 7	4 of 4	0.70	Down
Midgut	933 ± 20	4 of 4	1.80	Up
Tubule	455 ± 60	4 of 4	0.90	None
Hindgut	311 ± 10	4 of 4	0.60	Down
Heart	758 ± 56	4 of 4	1.48	Up
Fat body	1213 ± 162	4 of 4	2.36	Up
Ovary	651 ± 18	4 of 4	1.30	Up
Testis	392 ± 12	4 of 4	0.80	Down
Male accessory glands	1190 ± 47	4 of 4	2.30	Up
Virgin spermatheca	1038 ± 37	4 of 4	2.02	Up
Mated spermatheca	1277 ± 120	4 of 4	2.49	Up
Adult carcass	544 ± 28	4 of 4	1.10	None
Larval CNS	612 ± 24	4 of 4	1.19	Up
Larval Salivary gland	3325 ± 172	4 of 4	6.47	Up
Larval midgut	798 ± 63	4 of 4	1.55	Up
Larval tubule	453 ± 21	4 of 4	0.90	None
Larval hindgut	659 ± 56	4 of 4	1.28	None
Larval fat body	1603 ± 202	4 of 4	3.10	Up
Larval trachea	922 ± 244	4 of 4	1.79	Up
Larval carcass	1163 ± 106	4 of 4	2.26	Up
S2 cells (growing)	1289 ± 21	4 of 4	2.51	Up
Whole fly	513 ± 16	4 of 4

Looking for CG5474-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720