FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5489-RB through 18771 annotations produced 1 hits

Autophagy-specific gene 7 (Atg7):

Annotation Number : CG5489
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034366
Gbrowse : chr2R:14507960-14512553 (-) // 100.0 //
Probeset : 1637240_a_at
Accessions : protein= NP_611350; /// NP_725809;, nucleotide= NM_137506; /// NM_166298;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0034366.
TRiP has 2 RNAi stocks for FBgn0034366 available for purchase.
VDRC has 4 RNAi stocks for FBgn0034366 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	59 ± 1	4 of 4	0.80	Down
Head	57 ± 4	4 of 4	0.80	Down
Eye	40 ± 2	4 of 4	0.54	Down
Thoracicoabdominal ganglion	64 ± 3	4 of 4	0.90	None
Salivary gland	116 ± 1	4 of 4	1.55	Up
Crop	107 ± 3	4 of 4	1.40	Up
Midgut	44 ± 2	4 of 4	0.60	Down
Tubule	366 ± 46	4 of 4	4.90	Up
Hindgut	57 ± 3	4 of 4	0.80	Down
Heart	58 ± 3	4 of 4	0.78	Down
Fat body	64 ± 6	4 of 4	0.86	None
Ovary	122 ± 7	4 of 4	1.60	Up
Testis	47 ± 3	4 of 4	0.60	Down
Male accessory glands	97 ± 3	4 of 4	1.30	Up
Virgin spermatheca	74 ± 8	4 of 4	1.00	None
Mated spermatheca	99 ± 9	4 of 4	1.33	None
Adult carcass	61 ± 6	4 of 4	0.80	None
Larval CNS	95 ± 9	4 of 4	1.28	Up
Larval Salivary gland	89 ± 1	4 of 4	1.19	Up
Larval midgut	72 ± 15	4 of 4	0.97	None
Larval tubule	159 ± 7	4 of 4	2.10	Up
Larval hindgut	62 ± 11	4 of 4	0.83	None
Larval fat body	521 ± 65	4 of 4	7.00	Up
Larval trachea	40 ± 9	4 of 4	0.54	Down
Larval carcass	126 ± 49	4 of 4	1.69	None
S2 cells (growing)	105 ± 0	4 of 4	1.41	Up
Whole fly	74 ± 3	4 of 4

Looking for CG5489-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720