FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5507-RA through 18771 annotations produced 1 hits

48' transcript (T48):

Annotation Number : CG5507
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004359
Gbrowse : chr3R:22707455-22736719 (+) // 100.0 //
Probeset : 1636245_at
Accessions : protein= NP_524522;, nucleotide= NM_079798;
Pathway : 0016324 // apical plasma membrane // inferred from direct assay
FlyMine data for FBgn0004359.
BDGP gene expression has embryonic in situ data for T48: 2 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0004359 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004359 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	47 ± 1	4 of 4	0.80	Down
Head	86 ± 5	4 of 4	1.40	Up
Eye	143 ± 6	4 of 4	2.39	Up
Thoracicoabdominal ganglion	56 ± 2	4 of 4	0.90	None
Salivary gland	49 ± 4	4 of 4	0.82	None
Crop	293 ± 9	4 of 4	4.90	Up
Midgut	14 ± 2	4 of 4	0.20	Down
Tubule	234 ± 17	4 of 4	3.90	Up
Hindgut	69 ± 2	4 of 4	1.20	None
Heart	45 ± 2	4 of 4	0.76	Down
Fat body	47 ± 3	4 of 4	0.79	Down
Ovary	84 ± 1	4 of 4	1.40	Up
Testis	26 ± 1	4 of 4	0.40	Down
Male accessory glands	29 ± 4	4 of 4	0.50	Down
Virgin spermatheca	19 ± 1	4 of 4	0.33	Down
Mated spermatheca	21 ± 2	4 of 4	0.36	Down
Adult carcass	84 ± 6	4 of 4	1.40	Up
Larval CNS	29 ± 2	4 of 4	0.49	Down
Larval Salivary gland	22 ± 1	4 of 4	0.37	Down
Larval midgut	14 ± 2	4 of 4	0.24	Down
Larval tubule	31 ± 2	4 of 4	0.50	Down
Larval hindgut	29 ± 1	4 of 4	0.48	Down
Larval fat body	29 ± 6	4 of 4	0.50	Down
Larval trachea	113 ± 7	4 of 4	1.89	Up
Larval carcass	59 ± 4	4 of 4	0.99	None
S2 cells (growing)	58 ± 1	4 of 4	0.96	None
Whole fly	60 ± 2	4 of 4

Looking for CG5507-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720