FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5535-RA through 18771 annotations produced 1 hits

(CG5535):

Annotation Number : CG5535
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036764
Gbrowse : chr3L:17845723-17849864 (-) // 100.0 //
Probeset : 1627343_a_at
Accessions : protein= NP_649019; /// NP_730312;, nucleotide= NM_140762; /// NM_168753;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015171
FlyMine data for FBgn0036764.
VDRC has 3 RNAi stocks for FBgn0036764 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	33 ± 1	4 of 4	0.20	Down
Head	62 ± 14	4 of 4	0.30	Down
Eye	160 ± 17	4 of 4	0.78	None
Thoracicoabdominal ganglion	35 ± 2	4 of 4	0.20	Down
Salivary gland	119 ± 7	4 of 4	0.58	Down
Crop	33 ± 0	4 of 4	0.20	Down
Midgut	71 ± 7	4 of 4	0.30	Down
Tubule	92 ± 12	4 of 4	0.50	Down
Hindgut	1330 ± 58	4 of 4	6.50	Up
Heart	24 ± 2	4 of 4	0.12	Down
Fat body	8 ± 9	2 of 4	0.04	Down
Ovary	307 ± 7	4 of 4	1.50	Up
Testis	29 ± 1	4 of 4	0.10	Down
Male accessory glands	338 ± 19	4 of 4	1.70	Up
Virgin spermatheca	39 ± 3	4 of 4	0.20	Down
Mated spermatheca	46 ± 2	4 of 4	0.23	Down
Adult carcass	23 ± 4	4 of 4	0.10	Down
Larval CNS	279 ± 31	4 of 4	1.37	Up
Larval Salivary gland	128 ± 7	4 of 4	0.63	Down
Larval midgut	70 ± 9	4 of 4	0.34	Down
Larval tubule	36 ± 1	4 of 4	0.20	Down
Larval hindgut	223 ± 20	4 of 4	1.09	None
Larval fat body	21 ± 2	4 of 4	0.10	Down
Larval trachea	118 ± 11	4 of 4	0.58	Down
Larval carcass	121 ± 15	4 of 4	0.60	Down
S2 cells (growing)	555 ± 11	4 of 4	2.72	Up
Whole fly	204 ± 13	4 of 4

Looking for CG5535-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720