FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5545-RA through 18771 annotations produced 1 hits

Olig family (Oli):

Annotation Number : CG5545
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032651
Gbrowse : chr2L:17589506-17591267 (+) // 100.0 //
Probeset : 1623378_at
Accessions : protein= NP_523592;, nucleotide= NM_078868;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0032651.
BDGP gene expression has embryonic in situ data for Oli: 54 pix of staining in 12 body parts.
BioGrid reports that CG5545 interacts with CG6223 CG9727 .
TRiP has 2 RNAi stocks for FBgn0032651 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032651 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	261 ± 6	4 of 4	19.30	Up
Head	55 ± 2	4 of 4	4.10	Up
Eye	23 ± 2	4 of 4	1.72	Up
Thoracicoabdominal ganglion	203 ± 3	4 of 4	15.00	Up
Salivary gland	8 ± 3	0 of 4	0.64	None
Crop	5 ± 1	0 of 4	0.40	Down
Midgut	4 ± 1	0 of 4	0.40	Down
Tubule	3 ± 1	0 of 4	0.30	Down
Hindgut	4 ± 2	0 of 4	0.30	Down
Heart	1 ± 0	0 of 4	0.10	Down
Fat body	6 ± 3	0 of 4	0.50	Down
Ovary	4 ± 0	1 of 4	0.30	Down
Testis	26 ± 1	4 of 4	1.90	Up
Male accessory glands	9 ± 1	0 of 4	0.70	None
Virgin spermatheca	4 ± 1	0 of 4	0.31	Down
Mated spermatheca	5 ± 1	0 of 4	0.38	Down
Adult carcass	14 ± 1	0 of 4	1.10	None
Larval CNS	312 ± 15	4 of 4	23.03	Up
Larval Salivary gland	4 ± 0	0 of 4	0.36	Down
Larval midgut	5 ± 1	0 of 4	0.40	Down
Larval tubule	3 ± 1	0 of 4	0.30	Down
Larval hindgut	4 ± 1	1 of 4	0.35	Down
Larval fat body	9 ± 2	2 of 4	0.70	None
Larval trachea	1 ± 1	0 of 4	0.08	Down
Larval carcass	3 ± 0	0 of 4	0.23	Down
S2 cells (growing)	6 ± 0	2 of 4	0.45	Down
Whole fly	13 ± 1	4 of 4

Looking for CG5545-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720