FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5548-RA through 18771 annotations produced 1 hits

NADH ubiquinone oxidoreductase B18 (CG5548):

Annotation Number : CG5548
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030605
Gbrowse : chrX:14957944-14958597 (+) // 100.0 //
Probeset : 1637018_at
Accessions : protein= NP_572993;, nucleotide= NM_132765;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0055114 // oxidation reduction // inferred fr
Interpro : 0005739 // mitochondrion // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I
FlyMine data for FBgn0030605.
BioGrid reports that CG5548 interacts with CG5711 .
TRiP has 1 RNAi stocks for FBgn0030605 available for purchase.
VDRC has 1 RNAi stocks for FBgn0030605 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	567 ± 14	4 of 4	0.90	None
Head	693 ± 41	4 of 4	1.20	None
Eye	727 ± 38	4 of 4	1.22	Up
Thoracicoabdominal ganglion	658 ± 24	4 of 4	1.10	None
Salivary gland	925 ± 33	4 of 4	1.55	Up
Crop	724 ± 27	4 of 4	1.20	Up
Midgut	723 ± 27	4 of 4	1.20	Up
Tubule	491 ± 3	4 of 4	0.80	Down
Hindgut	1116 ± 20	4 of 4	1.90	Up
Heart	846 ± 18	4 of 4	1.42	Up
Fat body	835 ± 77	4 of 4	1.40	Up
Ovary	391 ± 13	4 of 4	0.70	Down
Testis	244 ± 4	4 of 4	0.40	Down
Male accessory glands	520 ± 12	4 of 4	0.90	Down
Virgin spermatheca	572 ± 42	4 of 4	0.96	None
Mated spermatheca	506 ± 20	4 of 4	0.85	Down
Adult carcass	1328 ± 73	4 of 4	2.20	Up
Larval CNS	491 ± 51	4 of 4	0.82	Down
Larval Salivary gland	783 ± 54	4 of 4	1.31	Up
Larval midgut	526 ± 34	4 of 4	0.88	None
Larval tubule	585 ± 34	4 of 4	1.00	None
Larval hindgut	924 ± 34	4 of 4	1.54	Up
Larval fat body	383 ± 35	4 of 4	0.60	Down
Larval trachea	565 ± 38	4 of 4	0.95	None
Larval carcass	889 ± 47	4 of 4	1.49	Up
S2 cells (growing)	503 ± 24	4 of 4	0.84	Down
Whole fly	598 ± 17	4 of 4

Looking for CG5548-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720