FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5554-RA through 18771 annotations produced 1 hits

(CG5554):

Annotation Number : CG5554
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034914
Gbrowse : chr2R:19732414-19734547 (+) // 100.0 //
Probeset : 1632482_at
Accessions : protein= NP_611838;, nucleotide= NM_137994;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0003756 // protein disulfide isomerase activity // inferred from sequence or structural similarity /// 0003756 // protei
FlyMine data for FBgn0034914.
VDRC has 1 RNAi stocks for FBgn0034914 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	385 ± 14	4 of 4	1.20	Up
Head	226 ± 12	4 of 4	0.70	Down
Eye	234 ± 4	4 of 4	0.72	Down
Thoracicoabdominal ganglion	339 ± 11	4 of 4	1.00	None
Salivary gland	341 ± 13	4 of 4	1.05	None
Crop	272 ± 6	4 of 4	0.80	Down
Midgut	289 ± 5	4 of 4	0.90	Down
Tubule	466 ± 10	4 of 4	1.40	Up
Hindgut	286 ± 5	4 of 4	0.90	Down
Heart	423 ± 14	4 of 4	1.30	Up
Fat body	360 ± 40	4 of 4	1.11	None
Ovary	395 ± 6	4 of 4	1.20	Up
Testis	695 ± 21	4 of 4	2.10	Up
Male accessory glands	859 ± 10	4 of 4	2.60	Up
Virgin spermatheca	380 ± 19	4 of 4	1.17	None
Mated spermatheca	399 ± 8	4 of 4	1.23	Up
Adult carcass	196 ± 8	4 of 4	0.60	Down
Larval CNS	655 ± 42	4 of 4	2.01	Up
Larval Salivary gland	1864 ± 56	4 of 4	5.73	Up
Larval midgut	367 ± 14	4 of 4	1.13	None
Larval tubule	561 ± 8	4 of 4	1.70	Up
Larval hindgut	616 ± 18	4 of 4	1.89	Up
Larval fat body	4589 ± 558	4 of 4	14.10	Up
Larval trachea	909 ± 21	4 of 4	2.79	Up
Larval carcass	492 ± 3	4 of 4	1.51	Up
S2 cells (growing)	566 ± 19	4 of 4	1.74	Up
Whole fly	325 ± 10	4 of 4

Looking for CG5554-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720