FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5621-RA through 18771 annotations produced 1 hits

(CG5621):

Annotation Number : CG5621
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038840
Gbrowse : chr3R:16727715-16733987 (+) // 100.0 //
Probeset : 1641131_at
Accessions : protein= NP_001036735; /// NP_650927;, nucleotide= NM_001043270; /// NM_142670;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activit
FlyMine data for FBgn0038840.
BDGP gene expression has embryonic in situ data for CG5621: 4 pix of staining in 1 body parts.
Homophila reports that CG5621 is a close match (2e-118) to human gene GLUR3;GRIA3;MRX94 (NP_000819), a gene associated with Mental retardation, X-linked 94, 300699 (3).
TRiP has 1 RNAi stocks for FBgn0038840 available for purchase.
VDRC has 4 RNAi stocks for FBgn0038840 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	41 ± 1	4 of 4	1.90	Up
Head	25 ± 2	4 of 4	1.10	None
Eye	7 ± 1	2 of 4	0.31	Down
Thoracicoabdominal ganglion	39 ± 3	4 of 4	1.80	Up
Salivary gland	11 ± 0	0 of 4	0.50	Down
Crop	25 ± 3	4 of 4	1.20	None
Midgut	15 ± 1	2 of 4	0.70	Down
Tubule	4 ± 1	0 of 4	0.20	Down
Hindgut	6 ± 0	1 of 4	0.30	Down
Heart	8 ± 1	2 of 4	0.40	Down
Fat body	19 ± 7	3 of 4	0.85	None
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	8 ± 1	2 of 4	0.40	Down
Male accessory glands	8 ± 1	1 of 4	0.40	Down
Virgin spermatheca	29 ± 6	4 of 4	1.31	None
Mated spermatheca	31 ± 9	3 of 4	1.43	None
Adult carcass	77 ± 8	4 of 4	3.50	Up
Larval CNS	9 ± 3	4 of 4	0.45	Down
Larval Salivary gland	8 ± 1	3 of 4	0.37	Down
Larval midgut	0 ± 0	0 of 4	0.02	Down
Larval tubule	5 ± 0	0 of 4	0.30	Down
Larval hindgut	1 ± 0	0 of 4	0.08	Down
Larval fat body	3 ± 2	0 of 4	0.20	Down
Larval trachea	1 ± 1	0 of 4	0.08	Down
Larval carcass	1 ± 1	0 of 4	0.08	Down
S2 cells (growing)	0 ± 0	0 of 4	0.03	Down
Whole fly	22 ± 1	4 of 4

Looking for CG5621-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720