Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG5637-RA through 18771 annotations produced 1 hits



chr3R:14982961-14985924 (+) // 100.0 // (nanos):

Annotation Number : CG5637
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1632713_at
Accessions : protein= , nucleotide= NP_476658;
Pathway : "0001709 // cell fate determination // traceable author statement /// 0006378 // mRNA polyadenylation // traceable autho
Interpro : embryo // non-traceable author statement /// 0008595 // anterior/posterior axis specification
FlyMine data for full length.
BioGrid reports that CG5637 interacts with CG7655 CG8340 CG9025 CG9415 CG1034 CG1034 CG1034 CG3399 CG11181 CG6502 CG9786 CG9786 CG9786 CG9786 CG9786 CG17743 CG17743 CG12058 CG10901 CG10901 CG10901 CG9755 CG9755 CG9755 CG10076 CG5753 CG9450 CG3506 CG3506 CG3506 CG11181 CG10719 CG10719 CG10728 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00Down
Head2 ± 00 of 4 0.00Down
Eye2 ± 10 of 4 0.00Down
Thoracicoabdominal ganglion4 ± 12 of 4 0.00Down
Salivary gland11 ± 50 of 4 0.01Down
Crop4 ± 10 of 4 0.00Down
Midgut2 ± 00 of 4 0.00Down
Tubule25 ± 162 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart0 ± 00 of 4 0.00Down
Fat body13 ± 72 of 4 0.01Down
Ovary2058 ± 294 of 4 1.70Up
Testis37 ± 14 of 4 0.00Down
Male accessory glands2 ± 10 of 4 0.00Down
Virgin spermatheca18 ± 14 of 4 0.02Down
Mated spermatheca9 ± 33 of 4 0.01Down
Adult carcass32 ± 182 of 4 0.00Down
Larval CNS2 ± 12 of 4 0.00Down
Larval Salivary gland2 ± 10 of 4 0.00Down
Larval midgut8 ± 12 of 4 0.01Down
Larval tubule5 ± 02 of 4 0.00Down
Larval hindgut4 ± 02 of 4 0.00Down
Larval fat body16 ± 23 of 4 0.00Down
Larval trachea1 ± 20 of 4 0.00Down
Larval carcass1 ± 00 of 4 0.00Down
S2 cells (growing)3 ± 10 of 4 0.00Down
Whole fly1189 ± 544 of 4

Looking for CG5637-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime