FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5641-RA through 18771 annotations produced 1 hits

Interleukin enhancer binding factor (CG5641):

Annotation Number : CG5641
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038046
Gbrowse : chr3R:8253510-8255002 (-) // 100.0 //
Probeset : 1627873_at
Accessions : protein= NP_650196;, nucleotide= NM_141939;
Pathway : via spliceosome // inferred by curator /// 0006350 // transcription // inferred from electronic annotation /// 0006955
Interpro : DNA-dependent // inferred from sequence or structural similarity"
FlyMine data for FBgn0038046.
BDGP gene expression has embryonic in situ data for CG5641: 26 pix of staining in 19 body parts.
BioGrid reports that CG5641 interacts with CG9326 CG9986 .
VDRC has 5 RNAi stocks for FBgn0038046 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	206 ± 6	4 of 4	1.10	None
Head	132 ± 11	4 of 4	0.70	None
Eye	291 ± 17	4 of 4	1.61	Up
Thoracicoabdominal ganglion	173 ± 8	4 of 4	1.00	None
Salivary gland	83 ± 6	4 of 4	0.46	Down
Crop	77 ± 3	4 of 4	0.40	Down
Midgut	82 ± 4	4 of 4	0.50	Down
Tubule	61 ± 4	4 of 4	0.30	Down
Hindgut	86 ± 5	4 of 4	0.50	Down
Heart	87 ± 7	4 of 4	0.48	Down
Fat body	88 ± 3	4 of 4	0.49	Down
Ovary	233 ± 4	4 of 4	1.30	None
Testis	234 ± 7	4 of 4	1.30	None
Male accessory glands	163 ± 3	4 of 4	0.90	None
Virgin spermatheca	69 ± 1	4 of 4	0.38	Down
Mated spermatheca	72 ± 2	4 of 4	0.40	Down
Adult carcass	86 ± 5	4 of 4	0.50	Down
Larval CNS	518 ± 35	4 of 4	2.87	Up
Larval Salivary gland	251 ± 18	4 of 4	1.39	None
Larval midgut	74 ± 2	4 of 4	0.41	Down
Larval tubule	131 ± 3	4 of 4	0.70	None
Larval hindgut	137 ± 5	4 of 4	0.76	None
Larval fat body	131 ± 9	4 of 4	0.70	None
Larval trachea	192 ± 16	4 of 4	1.07	None
Larval carcass	132 ± 4	4 of 4	0.73	None
S2 cells (growing)	213 ± 1	4 of 4	1.18	None
Whole fly	180 ± 22	4 of 4

Looking for CG5641-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720