FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5662-RA through 18771 annotations produced 1 hits

(CG5662):

Annotation Number : CG5662
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030620
Gbrowse : chrX:15104430-15105413 (+) // 100.0 //
Probeset : 1628605_at
Accessions : protein= NP_573009;, nucleotide= NM_132781;
Pathway : 0005741 // mitochondrial outer membrane // inferred from sequence or structural similarity
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030620.
BDGP gene expression has embryonic in situ data for CG5662: 8 pix of staining in 1 body parts.
BioGrid reports that CG5662 interacts with CG9373 CG9393 .
VDRC has 2 RNAi stocks for FBgn0030620 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.20	Down
Head	2 ± 1	0 of 4	0.10	Down
Eye	1 ± 1	0 of 4	0.10	Down
Thoracicoabdominal ganglion	4 ± 3	0 of 4	0.20	Down
Salivary gland	8 ± 1	0 of 4	0.45	Down
Crop	2 ± 0	0 of 4	0.10	Down
Midgut	5 ± 2	0 of 4	0.30	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	2 ± 0	0 of 4	0.10	Down
Heart	3 ± 1	0 of 4	0.20	Down
Fat body	6 ± 2	0 of 4	0.33	Down
Ovary	2 ± 1	0 of 4	0.10	Down
Testis	259 ± 9	4 of 4	13.60	Up
Male accessory glands	1 ± 0	0 of 4	0.10	Down
Virgin spermatheca	5 ± 1	0 of 4	0.27	Down
Mated spermatheca	4 ± 1	0 of 4	0.21	Down
Adult carcass	6 ± 3	0 of 4	0.40	Down
Larval CNS	3 ± 1	0 of 4	0.17	Down
Larval Salivary gland	17 ± 2	2 of 4	0.92	None
Larval midgut	9 ± 2	0 of 4	0.51	Down
Larval tubule	3 ± 0	0 of 4	0.20	Down
Larval hindgut	7 ± 0	0 of 4	0.39	Down
Larval fat body	23 ± 9	1 of 4	1.20	None
Larval trachea	5 ± 1	1 of 4	0.31	Down
Larval carcass	3 ± 0	0 of 4	0.17	Down
S2 cells (growing)	2 ± 0	0 of 4	0.12	Down
Whole fly	19 ± 1	1 of 4

Looking for CG5662-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720