FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG5670-RD through 18771 annotations produced 2 hits

March 2006 (FlyBase/BDGP 5.3) (chr3R:16783482-16801017 (+) // 99.9 //):

Annotation Number : CG5670
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : Atpalpha
Gbrowse :
Probeset : 1625719_at
Accessions : protein= B5RIT8 /// C8VUY7 /// P13607 /// Q95S08, nucleotide= EC:3.6.3.9
FlyMine data for Atpalpha.
Homophila reports that CG5670 is a close match (1e-11) to human gene ATP7A;MK;MNK;OHS (NP_000043), a gene associated with Cutis laxa, neonatal (3);Menkes disease, 309400 (3);Occipital horn syndrome, 304150 (3).
BioGrid reports that CG5670 interacts with CG6692 CG6864 CG7622 CG8368 CG8884 CG9060 CG9436 CG9653 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2489 ± 69	4 of 4	11.60	Up
Head	1011 ± 64	4 of 4	4.70	Up
Eye	2985 ± 141	4 of 4	13.97	Up
Thoracicoabdominal ganglion	3106 ± 117	4 of 4	14.50	Up
Salivary gland	195 ± 8	4 of 4	0.91	None
Crop	321 ± 10	4 of 4	1.50	Up
Midgut	81 ± 7	4 of 4	0.40	Down
Tubule	314 ± 4	4 of 4	1.50	Up
Hindgut	812 ± 26	4 of 4	3.80	Up
Heart	630 ± 60	4 of 4	2.95	Up
Fat body	83 ± 5	4 of 4	0.39	Down
Ovary	34 ± 0	4 of 4	0.20	Down
Testis	26 ± 2	4 of 4	0.10	Down
Male accessory glands	167 ± 10	4 of 4	0.80	None
Virgin spermatheca	97 ± 2	4 of 4	0.46	Down
Mated spermatheca	123 ± 7	4 of 4	0.58	Down
Adult carcass	334 ± 23	4 of 4	1.60	Up
Larval CNS	1138 ± 74	4 of 4	5.33	Up
Larval Salivary gland	88 ± 8	4 of 4	0.41	Down
Larval midgut	72 ± 4	4 of 4	0.34	Down
Larval tubule	191 ± 1	4 of 4	0.90	None
Larval hindgut	281 ± 19	4 of 4	1.32	Up
Larval fat body	40 ± 7	4 of 4	0.20	Down
Larval trachea	375 ± 78	4 of 4	1.76	Up
Larval carcass	109 ± 6	4 of 4	0.51	Down
S2 cells (growing)	163 ± 4	4 of 4	0.77	Down
Whole fly	213 ± 15	4 of 4

March 2006 (FlyBase/BDGP 5.3) (chr3R:16774435-16800053 (+) // 100.0 //):

Annotation Number : CG5670
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : Atpalpha
Gbrowse :
Probeset : 1639145_s_at
Accessions : protein= B5RIT8 /// C8VUY7 /// P13607 /// Q95S08, nucleotide= EC:3.6.3.9
FlyMine data for Atpalpha.
Homophila reports that CG5670 is a close match (1e-11) to human gene ATP7A;MK;MNK;OHS (NP_000043), a gene associated with Cutis laxa, neonatal (3);Menkes disease, 309400 (3);Occipital horn syndrome, 304150 (3).
BioGrid reports that CG5670 interacts with CG6692 CG6864 CG7622 CG8368 CG8884 CG9060 CG9436 CG9653 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1673 ± 56	4 of 4	2.50	Up
Head	1115 ± 117	4 of 4	1.60	Up
Eye	1686 ± 172	4 of 4	2.47	Up
Thoracicoabdominal ganglion	2111 ± 113	4 of 4	3.10	Up
Salivary gland	1193 ± 44	4 of 4	1.75	Up
Crop	979 ± 38	4 of 4	1.40	Up
Midgut	707 ± 35	4 of 4	1.00	None
Tubule	5427 ± 211	4 of 4	7.90	Up
Hindgut	3624 ± 85	4 of 4	5.30	Up
Heart	536 ± 34	4 of 4	0.79	None
Fat body	305 ± 31	4 of 4	0.45	Down
Ovary	503 ± 12	4 of 4	0.70	Down
Testis	113 ± 7	4 of 4	0.20	Down
Male accessory glands	329 ± 11	4 of 4	0.50	Down
Virgin spermatheca	292 ± 16	4 of 4	0.43	Down
Mated spermatheca	314 ± 7	4 of 4	0.46	Down
Adult carcass	683 ± 50	4 of 4	1.00	None
Larval CNS	736 ± 118	4 of 4	1.08	None
Larval Salivary gland	479 ± 17	4 of 4	0.70	Down
Larval midgut	265 ± 29	4 of 4	0.39	Down
Larval tubule	996 ± 28	4 of 4	1.50	Up
Larval hindgut	1255 ± 37	4 of 4	1.84	Up
Larval fat body	185 ± 13	4 of 4	0.30	Down
Larval trachea	778 ± 57	4 of 4	1.14	None
Larval carcass	798 ± 72	4 of 4	1.17	None
S2 cells (growing)	1256 ± 49	4 of 4	1.84	Up
Whole fly	683 ± 50	4 of 4

Looking for CG5670-RD. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720